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. 2021 Mar 3;11:5038. doi: 10.1038/s41598-021-83996-2

Table 4.

Prediction of TFs binding to 6 different SNP sites. TFs with a score of more than 10 or a difference in score of more than 4 are shown.

Position pwmname Allel Score Allel Score
-52 / -69 RARA::RXRG GC 13.40 AT
E2F6 GC 12.22 AT
SP1 GC 11.21 AT
NR2F1 GC 10.96 AT
Pparg::Rxra GC 10.09 AT
KLF5 GC 10.06 AT
Nr2e1 GC AT 11.79
-513 CDX1 G 6.08 A 10.80
HOXA13 G 6.21 A 10.96
FOXF2 G 7.10 A 14.18
Hoxd8 G 7.68 A 12.18
Foxj3 G A 14.19
Foxj2 G A 13.58
FOXG1 G A 13.54
FOXL1 G A 12.01
FOXP2 G A 11.98
Sox5 G A 11.92
SOX15 G A 11.89
SRY G A 11.79
Foxq1 G A 11.67
CDX2 G A 11.45
FOXK2 G A 11.21
Hoxc9 G A 11.20
FOXO4 G A 11.12
FOXO6 G A 11.06
Hoxa9 G A 10.77
FOXC2 G A 10.77
Foxq1 G A 10.69
FOXK1 G A 10.29
FOXI1 G A 10.25
FOXO3 G A 10.21
SOX9 G A 10.18
-567 GATA1::TAL1 T 10.76 G 16.21
-631 PRDM1 G 11.25 T 10.18
IRF1 G 10.79 T 11.51