Table 2.

Minimum sequence identities for Aliivibrio from trimmed and ungapped sequence pairs within intra-species groups.

Group	Strains	MLSA identity (%)	16S identity (%)	5-gene identity (%)	5-gene GC (avg, %)
A. finisterrensis	12	≥ 98.30	≥ 99.74	≥ 97.76	43.134
A. fischeri	30	≥ 97.88	≥ 98.80	≥ 97.44	42.898
A. logei	14	≥ 99.19	≥ 98.80	≥ 99.14	43.088
A. salmonicida	18	≥ 99.45	≥ 99.66	≥ 99.39	42.647
A. sifiae	19	≥ 97.77	≥ 99.46	≥ 97.25	42.502
Aliivibrio sp. “vili”	2	≥ 99.96	100	≥ 99.95	42.917
Aliivibrio sp. “thrudae”	3	100	100	100	42.894
Aliivibrio sp. “bragi”	3	≥ 99.54	99.83	99.46	42.742
Aliivibrio sp. “magnii”	2	≥ 99.74	100	99.67	42.778
Aliivibrio sp. “friggae”	5	99.71–98.17	≥ 98.72	99.74–98.00	42.679
Aliivibrio sp. “thorii”	3	99.96–99.49	99.83–97.87	≥ 99.93	42.537
Aliivibrio wodanis	22	≥ 98.11	≥ 99.66	≥ 97.62	42.653
Aliivibrio	134	≥ 89.42	≥ 96.65	≥ 87.05	42.786

The MLSA void of the 16S rRNA gene is here defined as a 5-gene concatemer. Aliivibrio sp. appey-12 is included in the full set of Aliivibrio. For individual gene measurements see Supplementary Table 4.