Table 1.
Expression Value* | Expression Value in CYP-overexpressing cells vs human hepatocytes (fold change level**) | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
HepG2 | HepG2-empty vector | CYP-overexpressing HepG2 | Human Hepatocytes | |||||||
CYP Gene | Average | S.D. | Average | S.D. | Cell lines | Average | S.D. | Average | S.D. | |
CYP1A1 | 2.10 | 0.62 | 3.12 | 0.20 | HepG2-CYP1A1 | 9230.86 | 570.06 | 3.15 | 0.37 | +++ |
CYP1A2 | N.D. | N.D. | HepG2-CYP1A2 | 6085.21 | 316.73 | 28.38 | 1.63 | +++ | ||
CYP1B1 | N.D. | N.D. | HepG2-CYP1B1 | 7260.78 | 301.46 | 28.91 | 1.42 | +++ | ||
CYP2A6 | 0.34 | 0.07 | 0.36 | 0.17 | HepG2-CYP2A6 | 14958.27 | 1494.98 | 1330.04 | 80.42 | ++ |
CYP2B6 | 34.56 | 0.76 | 32.29 | 0.80 | HepG2-CYP2B6 | 6310.56 | 909.17 | 869.33 | 71.43 | + |
CYP2C8 | N.D. | N.D. | HepG2-CYP2C8 | 3624.38 | 546.40 | 1122.95 | 44.64 | + | ||
CYP2C9 | N.D. | N.D. | HepG2-CYP2C9 | 3848.98 | 196.82 | 1284.64 | 114.59 | + | ||
CYP2C18 | 0.04 | 0.00 | 0.04 | 0.00 | HepG2-CYP2C18 | 7289.49 | 420.42 | 341.21 | 30.01 | ++ |
CYP2C19 | N.D. | N.D. | HepG2-CYP2C19 | 4568.73 | 295.48 | 35.96 | 0.71 | +++ | ||
CYP2D6 | N.D. | N.D. | HepG2-CYP2D6 | 525.41 | 83.72 | 13.50 | 3.36 | ++ | ||
CYP2E1 | 0.04 | 0.01 | 0.04 | 0.00 | HepG2-CYP2E1 | 2005.09 | 132.22 | 5223.96 | 348.51 | − |
CYP3A4 | N.D. | N.D. | HepG2-CYP3A4 | 1849.10 | 237.69 | 838.40 | 7.13 | + | ||
CYP3A5 | 1.57 | 0.15 | 1.99 | 0.08 | HepG2-CYP3A5 | 10034.07 | 853.00 | 872.15 | 83.79 | ++ |
CYP3A7 | 1.38 | 0.15 | 1.57 | 0.04 | HepG2-CYP3A7 | 6466.39 | 211.30 | 11.60 | 1.48 | +++ |
N.D., not detected.
Expression Value is calculated based on the assumption that the expression level of the housekeeping gene GAPDH is 10,000 copies (10, 000 is arbitrary). E = 2−ΔCt * 10,000; ΔCt = Ct of test gene-Ct of GAPDH.
Fold change level was defined as +++, fold change > 100;++, fold change = 10–100; +, fold change = 1–10; −, fold change = 0–1.