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. Author manuscript; available in PMC: 2021 Mar 4.
Published in final edited form as: J Environ Sci Health C Toxicol Carcinog. 2021;39(1):68–86. doi: 10.1080/26896583.2021.1880242

Table 1.

Comparison of CYP gene expressions in HepG2, HepG2-empty vector, CYP-overexpressing HepG2 cells and primary human hepatocytes.

Expression Value* Expression Value in CYP-overexpressing cells vs human hepatocytes (fold change level**)
HepG2 HepG2-empty vector CYP-overexpressing HepG2 Human Hepatocytes
CYP Gene Average S.D. Average S.D. Cell lines Average S.D. Average S.D.
CYP1A1 2.10 0.62 3.12 0.20 HepG2-CYP1A1 9230.86 570.06 3.15 0.37 +++
CYP1A2 N.D. N.D. HepG2-CYP1A2 6085.21 316.73 28.38 1.63 +++
CYP1B1 N.D. N.D. HepG2-CYP1B1 7260.78 301.46 28.91 1.42 +++
CYP2A6 0.34 0.07 0.36 0.17 HepG2-CYP2A6 14958.27 1494.98 1330.04 80.42 ++
CYP2B6 34.56 0.76 32.29 0.80 HepG2-CYP2B6 6310.56 909.17 869.33 71.43 +
CYP2C8 N.D. N.D. HepG2-CYP2C8 3624.38 546.40 1122.95 44.64 +
CYP2C9 N.D. N.D. HepG2-CYP2C9 3848.98 196.82 1284.64 114.59 +
CYP2C18 0.04 0.00 0.04 0.00 HepG2-CYP2C18 7289.49 420.42 341.21 30.01 ++
CYP2C19 N.D. N.D. HepG2-CYP2C19 4568.73 295.48 35.96 0.71 +++
CYP2D6 N.D. N.D. HepG2-CYP2D6 525.41 83.72 13.50 3.36 ++
CYP2E1 0.04 0.01 0.04 0.00 HepG2-CYP2E1 2005.09 132.22 5223.96 348.51
CYP3A4 N.D. N.D. HepG2-CYP3A4 1849.10 237.69 838.40 7.13 +
CYP3A5 1.57 0.15 1.99 0.08 HepG2-CYP3A5 10034.07 853.00 872.15 83.79 ++
CYP3A7 1.38 0.15 1.57 0.04 HepG2-CYP3A7 6466.39 211.30 11.60 1.48 +++

N.D., not detected.

*

Expression Value is calculated based on the assumption that the expression level of the housekeeping gene GAPDH is 10,000 copies (10, 000 is arbitrary). E = 2−ΔCt * 10,000; ΔCt = Ct of test gene-Ct of GAPDH.

**

Fold change level was defined as +++, fold change > 100;++, fold change = 10–100; +, fold change = 1–10; −, fold change = 0–1.