Table 3.

Genes related to metabolism in P. polymyxa SC2

Type	gene	product	log2FC(SH/S)
Fructose and mannose metabolism	PPSC2_05870	glycosyl hydrolase	2.69
	PPSC2_05910	GDP-mannose 4,6-dehydratase	7.84
	PPSC2_05865	mannose-1-phosphate guanylyltransferase	3.29
	PPSC2_02440	PTS friuctose transporter subunit IIB	3.46
	PPSC2_24735	rhamnose isomerase	−2.09
	PPSC2_02450	PTS mannose transporter subunit IID	2.2
	PPSC2_05905	GDP-L-fucose synthase	6.89
	PPSC2_02445	PTS mannose transporter subunit IIC	2.51
	PPSC2_24740	rhamnulose-1-phosphate aldolase	−2.43
	PPSC2_02435	PTS mannose transporter subunit IID	3.96
Starch and sucrose metabolism	PPSC2_05860	UDP-glucose 6-dehydrogenase	4.22
	PPSC2_05940	UDP-glucose 6-dehydrogenase	6.53
	PPSC2_16055	pectin methylesterase	3.4
	PPSC2_03770	levansucrase	3.25
	PPSC2_05805	UTP-glucose-1-phosphate uridylyltransferase	5.83
	PPSC2_03430	PTS beta-glucoside transporter subunit IIABC	−4.99
	PPSC2_03425	trehalose-6-phosphate hydrolase	−4.69
	PPSC2_13470	glucose-1-phosphate adenylyltransferase	−3.71
Glycerolipid metabolism	PPSC2_09660	phosphate acyltransferase	2.53
	PPSC2_00395	aldehyde dehydrogenase	6.65
	PPSC2_15995	glycerol dehydrogenase	−2.61
Alanine, aspartate and glutamate metabolism	PPSC2_01185	asparagine synthetase	4.66
	PPSC2_25355	adenylosuccinate synthetase	−2.86
	PPSC2_14255	aspartate ammonia-lyase	3.69
	PPSC2_12155	acetylornithine aminotransferase	6.28
	PPSC2_06000	asparagine synthase	5.58
	PPSC2_22115	glutamine--fructose-6-phosphate aminotransferase	−2.9
	PPSC2_16495	aspartate carbamoyltransferase	−2.11
Valine, leucine and isoleucine biosynthesis	PPSC2_09040	transferase	2.34
	PPSC2_07085	2-isopropylmalate synthase	2.76
	PPSC2_07090	3-isopropylmalate dehydrogenase	−2.59
	PPSC2_00400		7.88