Table 4.
DEGs related to secondary metabolic clusters in P. polymyxa SC2
| Gene | product | Name | log2FC(SH/S) | |
|---|---|---|---|---|
| polymyxin biosynthesis | PPSC2_22060 | polymyxin synthetase E | pmxE | 4.93 |
| PPSC2_22065 | multidrug ABC transporter permease | pmxD | 6.13 | |
| PPSC2_22070 | multidrug ABC transporter permease | pmxC | 5.13 | |
| PPSC2_22075 | ATP-dependent asparagine adenylase | pmxB | 4.95 | |
| PPSC2_22080 | synthetase 2 Gramicidin S synthetase II | pmxA | 2.93 | |
| fusaricidin biosynthesis | PPSC2_00380 | membrane protein | ymcC | 4.92 |
| PPSC2_00385 | enoyl-ACP reductase | fusG | 4.73 | |
| PPSC2_00390 | peptide synthetase | fusF | 2.77 | |
| PPSC2_00395 | aldehyde dehydrogenase | fusE | 6.65 | |
| PPSC2_00400 | acetolactate synthase large subunit | fusD | 7.88 | |
| PPSC2_00405 | 3-oxoacyl-ACP synthase | fusc | 7.74 | |
| PPSC2_00410 | 3-hydroxymyristoyldehydratase | fusB | 7.81 | |
| PPSC2_00415 | bacitracin synthetase | fusA | 7.5 |