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. 2021 Mar 4;14:24. doi: 10.1186/s12284-021-00468-x

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© The Author(s) 2021

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 2 — Genome-browser-oriented SNP Viewer for the 446 imputed O. rufipogon variants showing the Os05g0187500 gene region. A new function, based on previous data (Huang et al. 2012), graphically represents genomic regions in O. sativa where selective sweeps may have occurred: red bars, whole population; yellow bars, only in indica populations; green bars, only in japonica populations. This release also graphically shows regions with higher mutation rates (i.e., highly differentiated loci). Allele frequencies in a region can be displayed by clicking on the “Variant Detail” link