Table 1.
Differentially expressed genes (DEGs) identified in different comparisons.
| Comparison | Groups | DEGs | Upregulated | Downregulated |
|---|---|---|---|---|
| Control vs. salt | C03L vs. T03L | 205 | 149 | 56 |
| C09L vs. T09L | 1578 | 893 | 685 | |
| C03R vs. T03R | 1005 | 522 | 483 | |
| C09R vs. T09R | 1081 | 557 | 524 | |
| Salt-tolerant vs. salt-sensitive | C03L vs. C09L | 17,706 | 9080 | 8626 |
| T03L vs. T09L | 6966 | 2335 | 4631 | |
| C03R vs. C09R | 2032 | 1008 | 1024 | |
| T03R vs. T09R | 662 | 311 | 351 | |
| Leaf vs. root | C03L vs. C03R | 24,706 | 13,964 | 10,742 |
| C09L vs. C09R | 26,735 | 13,850 | 12,885 | |
| T03L vs. T03R | 19,222 | 7769 | 11,453 | |
| T09L vs. T09R | 25,078 | 13,994 | 11,084 |
C control, T treatment, 03 salt-tolerant genotype, 09 salt sensitive genotype; L leaf, R root.