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. 2021 Feb 26;2(1):100364. doi: 10.1016/j.xpro.2021.100364
REAGENT or RESOURCE SOURCE IDENTIFIER
Bacterial and virus strains

Escherichia coli Rosetta (DE3) pLysS Novagen Cat# 70956

Chemicals, peptides, and recombinant proteins

LB medium Nacalai Tesque Cat# 20068-75
TB medium Becton Dickinson Cat# 243820
Kanamycin Fujifilm-Wako Cat# 117-00341
CAS# 133-92-6
Chloramphenicol Fujifilm-Wako Cat# 032-19451
CAS# 56-75-7
Isopropyl β-d-galactopyranoside Fujifilm-Wako Cat# 099-05013
CAS: 367-93-1
Tris Nacalai Tesque Cat# 35434-21
CAS# 77-86-1
NaCl Nacalai Tesque Cat# 31320-34
CAS# 7647-14-5
Tris 2-carboxyethylphosphine (TCEP)-HCl Nacalai Tesque Cat# 07277-16
CAS# 51805-45-9
Glycerol Nacalai Tesque Cat# 17018-83
CAS# 56-81-5
cOmplete EDTA-free protease inhibitor Sigma-Aldrich Cat# 05056489001
Polyethyleneimine (MW 70,000) Fujifilm-Wako Cat# 167-11951
CAS# 9002-98-6
Ammonium sulfate Nacalai Tesque Cat# 02619-15
CAS# 7783-20-2
Imidazole Fujifilm-Wako Cat# 095-00015
CAS# 288-32-4
Thrombin Nacalai Tesque Cat# 33842-44
CAS# 9002-04-4
Guanidine hydrochloride Fujifilm-Wako Cat# 077-02435
CAS# 50-01-1
Ethanol Fujifilm-Wako Cat# 057-04456
CAS# 64-17-5
Bis-Tris Hampton Research Cat# HR2-783
CAS# 6976-37-0
HEPES Hampton Research Cat# HR2-729
CAS# 7365-45-9
Polyethylene glycol (PEG) 3350 Hampton Research Cat# HR2-144
CAS# 25322-68-3
SRC1 peptide (LTERHKILHRLLQEG) GenScript N/A
DMSO Nacalai Tesque Cat# 13445-45
CAS# 67-68-5
GW7647 Cayman Chemical Cat# 10008613
CAS# 265129-71-3
Bezafibrate Cayman Chemical Cat# 10009145
CAS# 41859-67-0
Tetradecylthioacetic acid (TTA) Fujifilm-Wako Cat# 209-18141
CAS# 2921-20-2
Wy14643 Cayman Chemical Cat# 70730
CAS# 50892-23-4
GW9662 Cayman Chemical Cat#70785
CAS# 22978-25-2
Ciprofibrate Fujifilm-Wako Cat# 033-21191
CAS# 52214-84-3
Fenofibric acid Combi-Blocks Cat# OR-1173
CAS# 42017-89-0
5,8,11,14-Eicosatetraynoic acid (ETYA) Cayman Chemical Cat# 90120
CAS# 1191-85-1
Eicosapentaenoic acid (EPA) Cayman Chemical Cat# 90110
CAS# 10417-94-4
Clofibric acid LKT Labs Cat# C4556
CAS# 882-09-7
Gemfibrozil Combi-Blocks Cat# OR-0524
CAS# 25812-30-0
Arachidonic acid Cayman Chemical Cat#10006607
CAS# 6610-25-9
Pemafibrate ChemScene Cat# CS-6084
CAS# 848259-27-8
Saroglitazar ChemScene Cat# CS-6149
CAS# 495399-09-2
Palmitic acid Sigma-Aldrich Cat# P0500-10G
CAS# 57-10-3
Stearic acid Sigma-Aldrich Cat# S4751-1G
CAS# 57-11-4
Oleic acid Nacalai Tesque Cat# 25630-51
CAS# 112-80-1

Deposited data

34 novel human PPARα-LBD co-crystal structures reported in Kamata et al. (2020) Protein Data Bank (PDB) Codes: 6KAX, 6KAY, 6KAZ, 6KB0, 6KB1, 6KB2, 6KB3, 6KB4, 6KB5, 6KB6, 6KB7, 6KB8, 6KB9, 6KBA, 6KYP, 6L36, 6L37, 6L38, 6LX4, 6LX5, 6LX6, 6LX7, 6LX8, 6LX9, 6LXA, 6LXB, 6LXC, 7BPY, 7BPZ, 7BQ0, 7BQ1, 7BQ2, 7BQ3, 7BQ4

Recombinant DNA

pET28a encoding human PPARα residues 200–468 (Oyama et al., 2009) N/A

Other

Bioshaker BR-43FL TAITEC Cat# 0053027-000
Ultrasonic disrupter UD-201 with Micro Tip TP-040 Tomy Cat# UD-201
AKTAprime plus Cytiva (GE Healthcare) N/A
HisTALON superflow cartridges (1 mL) Clontech Cat# 635650
HiTrap Q HP (1 mL) Cytiva (GE Healthcare) Cat# 17115301
HiLoad 16/600 Superdex 75 pg Cytiva (GE Healthcare) Cat# 28989333
Slide-A-Lyzer G2 dialysis cassette Thermo Fisher Cat# 87735
AMICON ULTRA-4, 4-mL; 3 kDa cutoff Merck Millipore Cat# UFC800324
AMICON ULTRA-15, 15-mL; 3 kDa cutoff Merck Millipore Cat# UFC900324
EasyXtal 15-Well Tool X-Seal (20) QIAGEN Cat# 132008
Dual-thickness MicroMounts (75 μm) MiTeGen Cat# M2-L18SP-75
18 mm mounted CryoLoop - 20 μm Hampton Research Cat# HR4-972
Bio-Rad protein assay Bio-Rad Cat# 5000006JA
Human hair (on the crown of the head) Young adult males N/A