Table 2.
physical parameter | scaling | (typical) prokaryote | (typical) eukaryote | comments |
---|---|---|---|---|
Reynolds number | Re = ρUL/μ | Re = 10−5–10−3
(L = 1–10 μm, U = 10–100 μm s−1) |
Re = 10−3–1 (L = 10–1000 μm, U = 10–1000 μm s−1) |
unicellular eukaryotes and prokaryotes are viscosity dominated |
Péclet number (fix D = 103 μm2 s−1 for small molecule) |
Pe = UL/D | Pe = 10−2–1 (L, U as above) |
Pe = 1–103
(L, U as above) |
prokaryotes are diffusion-limited and cannot reach* Pe > 1 |
diffusion constant (passive) |
D0 = kBT/(6πμa) |
D0 = 0.22 μm2 s−1
(a = 1 μm) |
D0 = 0.02 μm2 s−1
(a = 10 μm) |
eukaryotes 10× less susceptible to linear diffusion |
rotational diffusion (passive) | Drot = kBT/(8πμa3) |
Drot = 0.16 rad2 s−1
(a = 1 μm) |
Drot = 1.6 × 10−4 rad2 s−1
(a = 10 μm) |
eukaryotes 1000× less susceptible to rotational diffusion |
effective diffusion (active, depends on motility strategy) |
Da = v2τ/3 (τ = free-flight time, v = speed of runs) |
Da ≈ 133 μm2 s−1
(v ≈ 20 μm s−1, τ ≈ 1 s) |
Da ≈ 3.3 × 10−2 cm2 s−1
(v ≈ 100 μm s−1, τ ≈ 10 s) |
empirical: E. coli: [309] D ≈ 10–100 μm2 s−1; C. reinhardtii: [310] D ≈ 10−3 cm2 s−1; P. caudatum: [311] D ≈ 10−2 cm2 s−1 |
relevant for stochastic navigation | expected angular deviation in time τ θrms = √(2Drτ) |
θrms = 32° (for τ = 1 s) |
θrms = 1° (for τ = 1 s) |
prokaryotes are severely limited by rotational diffusion (cannot steer) |
relevant for spatial sensing | too small* | useful strategy for large and slow-moving cells | common strategy for amoeboid eukaryotes | |
relevant for helical klinotaxis | too small* | useful strategy to reorient toward vectorial cues | common strategy for free-swimming eukaryotes | |
sensitivity to mechanical stimuli (membrane tension) | ratio of channel opening and closing probabilities ΔE = work done to open channel (approx. sensitivity) |
bacterial MscS and MscL channels (osmotic nanovalves): [301] 5 approximately 10 mN m−1 |
hair cells, single-channel gating stiffness: [308] approximately 1 mN m−1 Piezo1: [312] approximately 1.4 mN m−1 |
1 kBT is 4 nm2 change in area under tension of 1 mN m−1
lytic tension of pure lipid bilayer approximately 20 mN m−1 |