Table 1. The identified single nucleotide polymorphism (SNP) markers for 16 agronomic traits in the association panel including 286 Iran bread wheat accessions grown under terminal drought stress (TDS) and well-watered (WW) conditions in semi-arid environments, Iran.
| Trait | Markera | Chrb | Position | Allelesc | TDS | WW | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Model | -log10 (P value) | MAF | Marker R2 (%) | Model | -log10 (P value) | MAF | Marker R2 (%) | |||||
| DTH | rs48214 | 3B | 68.263 | (222) C/(59) T | K+Q | 3.59 | 0.21 | 5.45 | K+Q | 3.35 | 0.21 | 5.13 |
| DTM | rs34236 | 2B | 62.594 | (258) A/(22) T | K | 3.79 | 0.08 | 6.52 | ||||
| rs28367 | 2A | 18.219 | (19) A/(262) G | K | 3.69 | 0.07 | 5.46 | |||||
| rs61739 | 4B | 44.689 | (28) A/(254) G | K | 3.74 | 0.09 | 5.54 | |||||
| DHTM | rs41211 | 2B | 72.825 | (221) A/(54) G | K+PCA | 4.34 | 0.21 | 8.50 | ||||
| rs19295 | 5A | 38.892 | (36) A/(234) G | K | 3.76 | 0.15 | 6.69 | K | 4.03 | 0.15 | 5.54 | |
| rs31147 | 7A | 71.904 | (30) C/(240) G | K | 3.83 | 0.14 | 6.81 | |||||
| PH | rs1184 | 2B | 55.205 | (58) A/(206) G | K+PCA | 3.92 | 0.24 | 6.56 | K+PCA | 4.25 | 0.24 | 7.31 |
| GY | rs65502 | 5B | 93.434 | (248) A/(31) T | K+PCA | 5.34 | 0.12 | 9.06 | K+PCA | 4.35 | 0.11 | 6.95 |
| TKW | rs54576 | 2A | 59.228 | (53) A/(221) G | K | 3.97 | 0.22 | 5.77 | K | 3.96 | 0.22 | 5.65 |
| rs17145 | 6A | 25.146 | (21) A/(252) G | K+Q | 3.49 | 0.10 | 4.98 | K | 3.96 | 0.09 | 5.65 | |
| SEL | rs998 | 6A | 53.619 | (154) A/(108) G | K+Q | 4.91 | 0.42 | 7.18 | K+Q | 5.38 | 0.41 | 7.70 |
| SEW | rs55852 | 3B | 77.361 | (139) A/(123) C | K | 3.63 | 0.45 | 4.88 | K | 3.78 | 0.45 | 5.13 |
| SN | rs51365 | 2D | 13.642 | (222) A/(52) C | K+PCA | 3.61 | 0.20 | 6.11 | ||||
| rs65502 | 5B | 93.434 | (248) A/(31) T | K+Q | 4.54 | 0.12 | 6.14 | K+Q | 4.06 | 0.11 | 5.44 | |
| rs64054 | 7A | 58.263 | (207) A/(63) G | K | 3.5 | 0.23 | 4.68 | |||||
| SPL | rs60932 | 3A | 53.669 | (24) A/(254) C | K+PCA | 5.03 | 0.10 | 7.59 | K+PCA | 5.01 | 0.09 | 7.51 |
| SPW | rs15276 | 1A | 44.512 | (204) C/(69) T | K+Q | 3.55 | 0.26 | 5.32 | ||||
| rs2368 | 1B | 32.984 | (218) G/(44) T | K+Q | 3.45 | 0.20 | 5.18 | |||||
| rs65502 | 5B | 93.434 | (248) A/(31) T | K+PCA | 4.09 | 0.12 | 8.99 | |||||
| rs53982 | 5D | 132.023 | (249) C/(33) T | K+PCA | 3.96 | 0.10 | 8.79 | K+PCA | 3.29 | 0.10 | 7.94 | |
| FLL | rs58293 | 4B | 50.376 | (264) C/(19) G | K+Q | 3.47 | 0.07 | 4.69 | ||||
| rs59732 | 6B | 60.336 | (234) C/(38) T | K+PCA | 3.79 | 0.16 | 5.36 | K+PCA | 3.79 | 0.16 | 4.97 | |
| FLW | rs6770 | 3B | 45.525 | (19) C/(245) T | K+Q | 3.95 | 0.10 | 6.02 | ||||
| PL | rs31423 | 7A | 32.091 | (207) A/(60) G | K+PCA | 3.28 | 0.23 | 5.45 | K+PCA | 3.32 | 0.23 | 5.07 |
| SHD | rs11489 | 4A | 136.19 | (265) C/(14) T | K+PCA | 4.05 | 0.05 | 6.84 | K+PCA | 3.87 | 0.05 | 6.64 |
| rs49193 | 6A | 25.146 | (258) G/(21) T | K | 4.15 | 0.08 | 5.81 | K | 4.12 | 0.07 | 5.81 | |
| AWL | rs59275 | 2A | 59.228 | (95) A/(170) G | K+PCA | 4.71 | 0.37 | 6.73 | K+PCA | 4.08 | 0.35 | 5.63 |
| rs8958 | 5B | 35.359 | (235) C/(35) T | K+PCA | 3.69 | 0.14 | 5.06 | K+PCA | 4.19 | 0.14 | 5.95 | |
The number of homozygous alleles is given in parentheses. The type of statistical matrices used in the GWASs is also provided.