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. 2021 Mar 5;16(3):e0247669. doi: 10.1371/journal.pone.0247669

Table 2. Differentially expressed gene analysis between control and sepsis followed by gene set pathway analysisa.

  GSE54514 GSE57065 GSE95233 GSE64456 GSE66099 GSE72829
Patient type Adult Adult Adult Pediatric Pediatric Pediatric
Control cases (n) 18 25 22 19 49 52
Sequential selection of sepsis cases (n) 18 25 22 19 49 52
Differentially expressed Genes (n) 176 7885 6784 3123 8229 7463
Up regulated pathway (n) 0 60 44 13 78 51
Down regulated pathway (n) 0 33 33 16 33 15
Up regulated immune pathway C, Fc, RIG C, Fc C, Fc, NK, K, TLR APC, C, CXC & etc, Fc, IgA, BCR, C, Fc, CXC & etc, LK, NK, TLR
Down regulated immune pathway APC, TCR, H, K APC, BCR, CXC & etc, IgA, TCR APC, IgA, TCR H, TCR APC, IgA, TCR

aDifferentially expressed gene was selected based on FDR (P<0.01).

APC, Antigen processing and presentation; BCR, B cell receptor signaling; C, Complement and coagulation; CXC & etc, chemokine signaling; Fc, Fc gamma R mediated phagocytosis or Fc epsilon RI signaling; H, hematopoietic cell lineage; IgA, intestinal immune network for IgA production; LM, leukocyte endothelial migration; NK, NK cell mediated cytotoxicity; RIG, RIG-I like receptor signaling; TLR, Toll like receptor signaling; TCR, T cell receptor signaling.