Table 3. Haplotype frequencies of selected SNPs in HOTAIR gene between endometriosis patients and controls.
SNPsa | Genotype/allele | No. (%) of patients | No. (%) of controls | p-valueb | Corrected p-valuec | OR (95% CI)a |
---|---|---|---|---|---|---|
rs1838169 | GG | 130 | 73 | 0.0004*** | 0.0024** | 1.7342 (1.2760–2.3571) |
rs4511324 | CG | 64 | 53 | 0.6171 | 1.0000 | 1.1013 (0.7538–1.6090) |
GA | 88 | 66 | 0.2222 | 1.0000 | 1.2331 (1.2331–1.7269) | |
CA | 498 | 514 | 0.0002*** | 0.0012** | 0.6597 (0.5289–0.8228) | |
rs1838169 | GG | 129 | 69 | <0.0001*** | 0.0003*** | 1.8463 (1.3512–2.5229) |
17720428 | GT | 85 | 63 | 0.1884 | 1.0000 | 1.2589 (0.8932–1.7742) |
CG | 69 | 55 | 0.4348 | 1.0000 | 1.1582 (0.8000–1.6768) | |
CT | 489 | 517 | <0.0001*** | 0.0002*** | 0.6250 (0.5004–0.7806) | |
rs4511324 | GG | 130 | 73 | 0.0002*** | 0.0012** | 1.7939 (1.3215–2.4351) |
17720428 | GT | 70 | 63 | 0.8065 | 1.0000 | 1.0437 (0.7313–1.4896) |
AG | 74 | 63 | 0.5657 | 1.0000 | 1.1093 (0.7805–1.5767) | |
AT | 538 | 561 | 0.0011** | 0.0066** | 0.9355 (0.7445–1.1754) |
aAbbreviations: SNP, single-nucleotide polymorphism; OR, odds ration; 95% CI, 95% confidence interval.
bp-values were calculated by χ2 test.
cBonferroni correction was applied to get the corrected p-value, which equals to p-value×6. Statistical significance
*, p-value <0.05
**, p-value <0.01
***, p-value <0.001.