Skip to main content
. Author manuscript; available in PMC: 2022 Mar 4.
Published in final edited form as: Mol Cell. 2021 Jan 15;81(5):1074–1083.e5. doi: 10.1016/j.molcel.2020.12.036

Key Resources Table

REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies
Rabbit polyclonal anti-RADX Novus Biologicals Cat#NBP2-13887; RRID: AB_2687552
Mouse monoclonal anti-RAD51 (14B4) Abcam Cat# ab213, RRID:AB_302856
Mouse monoclonal anti FLAG M2 Sigma Aldrich Cat#F3165; RRID:AB_259529
Rabbit polyclonal anti-GFP Santa Cruz Cat#sc-8334; RRID:AB_641123
Rabbit polyclonal to GST Abcam Cat# ab111947 AB_10861266
Mouse monoclonal anti-phospho-Histone H2A.X (Ser139) Millipore Cat#16-193, RRID:AB_310795
Mouse monoclonal anti BrdU BD Cat#347580; RRID:AB_10015219
Rat monoclonal anti BrdU Abcam Cat#ab6326; RRID:AB_305426
Goat anti-Mouse IgG (H+L) Highly Cross-Adsorbed Secondary Antibody, Alexa Fluor Plus 488 Life Technologies Cat# A32723; RRID:AB_2633275
Goat anti-Rat IgG (H+L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 594 Life Technologies Cat# A11007; RRID:AB_10561522
Chemicals, Peptides, and Recombinant Proteins
CldU Sigma Aldrich Cat#C6891
IdU Sigma Aldrich Cat#l7125
EdU VICB synthesis core N/A
Alexa Fluor 647 azide Thermo Fisher Cat#A10277
Hydroxyurea Sigma Aldrich Cat#H8627
MBP-RADX This study N/A
MBP-RADX OB2m This study N/A
MBP-RADX QVPK This study N/A
GFP-RADX This study N/A
RAD51 Provided by M.M. N/A
RAD51 K133R Provided by M.M. N/A
RAD51 K133A Provided by M.M. N/A
RPA Provided by W.J.C. N/A
GST-BRC3/4 Provided by Patrick Sung N/A
RPA-mCherry Provided by E.J.C. N/A
Critical Commercial Assays
Duolink In Situ PLA Probe Anti-Rabbit PLUS Sigma Aldrich Cat#DU092002
Duolink In Situ PLA Probe Anti-Rabbit MINUS Sigma Aldrich Cat#DU092004
Duolink In Situ Detection Reagents, Red Sigma Aldrich Cat#DU092008
Coverslips MicroSurfaces Inc. N/A
Experimental Models: Cell Lines
U2OS ATCC Cat#HTB-96; RRID:CVCL_0042
HEK293T ATCC Cat#CRL-11268; RRID:CVCL_1926
U2OS ΔRADX (Dungrawala et al., 2017) N/A
Oligonucleotides
dT60: 5’-TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT-3’ IDT N/A
dT72: 5’-TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT-3′ IDT N/A
OligoD1: 5’-AAATCAATCTAAAGTATATATGAGTAAACTTGGTCTGACAGTTACCAATGCTTAATCAGTGAGGCACCTATCTCAGCGATCTGTCTATTT-3’ IDT N/A
Recombinant DNA
Plasmid pDC1272 = pLEFP-FLAG-RADX This study N/A
Plasmid pMA32 = pLEGFP FLAG-RADX QVPK This study N/A
Plasmid pMA33 = pLEGFP-FLAG-RADX IV This study N/A
Plasmid pMA34 = pLEGFP-FLAG-RADX LLY This study N/A
Plasmid pMA35 = pLEGFP-FLAG-RADX R389E This study N/A
Plasmid pMA36 = pLEGFP-FLAG-RADX LF This study N/A
Plasmid pMA37 = pLEGFP-FLAG-RADX ELDD This study N/A
Plasmid pKB06 = pEF1a-RADX This study N/A
Plasmid pKB29= pEF1a-RADX OB2m This study N/A
Plasmid pMA39= pEF1a-RADX-QVPK This study N/A
Software and Algorithms
GraphPad Prism8/9 GraphPad Software https://www.graphpad.com/scientific-software/prism/; RRID: SCR_000306
ImageLab BioRad http://www.biorad.com/en-us/sku/1709690-image-lab-software; RRID:SCR_014210
MODELLER v9.16 (Eswar et al., 2006) https://salilab.org/modeller; RRID:SCR_008395
PyMOL Version 2.0 The PyMOL Molecular Graphics System, Version 2.0 Schrödinger, LLC. https://www.pymol.org/; RRID:SCR_000305
Scipion (de la Rosa-Trevin et al., 2016) http://scipion.i2pc.es; RRID:SCR_016738
Deposited Data
Unprocessed blots, gels and microscopy images This paper https://dx.doi.org/10.17632/g3rfkjw225.1