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. 2021 Feb 22;12:592303. doi: 10.3389/fimmu.2021.592303

Table 2.

Top genomic predictors obtained during external validation analysis.

Validation dataset identifier Cohort type Best AUROC Gene names
GSE54514# Adult 0.723 MMP8, CEACAM8, LCN2, RETN, CLEC5A, TGFBI, CEP55, MME, OLAH, SDC4
E-MEXP-3850* Pediatric 0.956 MMP8, TCN1, OLAH, CEP55, PLCB1, OLFM4, HCAR3, TGFBI, MS4A3, CEACAM8, SDC4
E-MEXP-3567# Pediatric 0.83 MMP8, CEACAM8, LCN2, RETN, CLEC5A, TGFBI, CEP55, MME, OLAH, SDC4
GSE40586# MIxed 0.822 MMP8, OLFM4, CEACAM8, RETN, LTF, HCAR3, IL1R2, MS4A3, TGFBI, DEFA4, MME, OLAH, SDC4, PLCB1, NLRP1
*

Kolmogorov-Smirnov test was performed on the ranked list of genes obtained using the tree-based variable importance method. Only the significant (p < 0.1) results are included in this list.

#

List of genes selected using the LASSO-based variable selection technique.