Table 2.
Validation dataset identifier | Cohort type | Best AUROC | Gene names |
---|---|---|---|
GSE54514# | Adult | 0.723 | MMP8, CEACAM8, LCN2, RETN, CLEC5A, TGFBI, CEP55, MME, OLAH, SDC4 |
E-MEXP-3850* | Pediatric | 0.956 | MMP8, TCN1, OLAH, CEP55, PLCB1, OLFM4, HCAR3, TGFBI, MS4A3, CEACAM8, SDC4 |
E-MEXP-3567# | Pediatric | 0.83 | MMP8, CEACAM8, LCN2, RETN, CLEC5A, TGFBI, CEP55, MME, OLAH, SDC4 |
GSE40586# | MIxed | 0.822 | MMP8, OLFM4, CEACAM8, RETN, LTF, HCAR3, IL1R2, MS4A3, TGFBI, DEFA4, MME, OLAH, SDC4, PLCB1, NLRP1 |
Kolmogorov-Smirnov test was performed on the ranked list of genes obtained using the tree-based variable importance method. Only the significant (p < 0.1) results are included in this list.
List of genes selected using the LASSO-based variable selection technique.