Table 5.

Dihedral Angle Recovery Rates and Overall RMSDs for Side-Chain Prediction on 136 Structures by Adding Native Conformers to Rotamer Libraries L1–L6^a

	χ1–4 recovery rate (%)			overall side-chain RMSD (Å)
library	all	core	surface	all	core	surface
L1	72.6 ± 0.2	91.0 ± 0.2	55.5 ± 0.3	1.39 ± 0.00	0.62 ± 0.02	1.92 ± 0.01
L2	74.7 ± 0.2	93.0 ± 0.2	57.4 ± 0.2	1.30 ± 0.01	0.48 ± 0.03	1.83 ± 0.02
L3	77.0 ± 0.1	93.9 ± 0.2	60.7 ± 0.1	1.22 ± 0.01	0.43 ± 0.01	1.72 ± 0.02
L4	45.7 ± 0.4	72.3 ± 0.4	24.5 ± 0.4	1.72 ± 0.01	0.78 ± 0.02	2.31 ± 0.01
L5	43.2 ± 0.2	68.5 ± 0.3	23.1 ± 0.2	1.73 ± 0.01	0.83 ± 0.02	2.33 ± 0.01
L6	41.2 ± 0.3	61.1 ± 0.3	21.8 ± 0.5	1.76 ± 0.01	0.86 ± 0.01	2.35 ± 0.01

^aThe best performance in each column is shown in bold. Each program was run five times using any of the six rotamer libraries, and the average and standard deviation are reported.