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. 2021 Feb 23;12:640937. doi: 10.3389/fimmu.2021.640937

Table 2.

In vivo and ex vivo engulfment assays.

Models Brain areas Engulfed substrates Techniques adopted References
Cx3xr1-/- mouse Hippocampus SNAP25+, PSD95+ synaptic materials Confocal microscopy; immune-gold electron microscopy (18)
Itgam-/-; C3-/- mouse Visual System RGC inputs Confocal microscopy dimensional (3D) surface volume rendering (15)
Trem2-/- mouse Hippocampus PSD95+ synaptic materials Fluorescent microscopy (20)
Zebrafish Spinal cord Apoptotic neuron Fluorescent microscopy, 3D rendering (157)
Mertk-/- Mouse Cortex Apoptotic neuron Time-lapse two-photon imaging (158)
Adult microglia ex vivo Cortex Alexa-488 labeled apoptotic (dNs) or live neurons Flow cytometry (70)
Amyloid beta (through the fluorescent marker Methoxy-XO4) (159)
Synaptic markers VGLUT1 and synaptophysin (160)

The table reports some of the experimental approaches used to study microglia engulfment in vivo and ex vivo in different animal models.