Table 2.
FISH probes that were applied for the detection and assessment of lesion association of abortifacients in placenta and fetal organs.
| Probe ID | Target | Systematic namea | Sequence 5′-3′ | References |
|---|---|---|---|---|
| Blich | B. licheniformis | S-S-Blich-0079-a-A-21 | Cy3-CTGACCTAAGGGAGCAAGCTC | (30)b |
| Cajej | C. jejuni | L-S-Cajej-1693-a-A-21 | Cy3-AGCTAACCACACCTTATACCG | (31) |
| Cburn | C. burnetii | S-S-Cburn-0443-a-A-18 | AF555-CTTGAGAATTTCTTCCCC | (11) |
| D223 | Fungi | L-D-Fungi-0223-a-A-18 | Cy3-CCACCCACTTAGAGCTGC | (32) |
| Eco45a | E. coli | L-S-Ecoli-1161-a-A-18 | Cy3-gcataagcgtcgctgccg | (33) |
| EUB338 | Domain bacteria | S-D-Bact-0338-a-A-18 | FITC-GCTGCCTCCCGTAGGAGT | (34) |
| Fnecr | F. necrophorum | S-S-Fnecr-0183-a-A-18 | Cy3-gattcctccatgcgaaaa | (12) |
| Lm-16S-2 | L. monocytogenes | S-S-Lmono-1243-a-A-18 | Cy3-CGACCCTTTGTACTA | (35) |
| Sau | S. aureus | S-S-Saure-0069-a-A-19 | Cy3-GAAGCAAGCTTCTCGTCCG | (36) |
| Tpyo | T. pyogenes | S-S-Apyog-0464-a-A-18 | Cy3-gcacataccgtcacaaaa | (37) |
a
According to The Oligonucleotide Probe Database nomenclature (38).
b
The reverse complement sequence of the B. licheniformis–specific TaqMan probe was used.