TABLE 1.
Strain or plasmid | Characteristics | References |
Strains | ||
E. coli HB101 | Laboratory E. coli strain | |
E. coli HB101 bamB:aph | bamB gene replaced with a kanamycin cassette | Rossiter et al., 2011 |
E. coli HB101 bamC:aph | bamC gene replaced with a kanamycin cassette | Rossiter et al., 2011 |
E. coli HB101 bamE:aph | bamE gene replaced with a kanamycin cassette | Rossiter et al., 2011 |
E. coli BW25113 | K-12 derivative | Baba et al., 2006 |
E. coli BW25113 tamA:aph | tamA gene replaced by kanamycin cassette | This study |
E. coli BW25113 tamB:aph | tamB gene replaced by kanamycin cassette | This study |
E. coli JWD3 | E. coli K-12 BamA depletion strain. | Lehr et al., 2010 |
E. coli JCM290 | E. coli K-12 BamD depletion strain. | Malinverni et al., 2006 |
Plasmids | ||
pQE60 NdeI | pQE60 with added NdeI restriction site in the multiple-cloning site and previously existing NdeI site removed | Raghunathan et al., 2011 |
pDR03 | pQE60NdeI carrying sadA gene in the NdeI-HindIII site | Raghunathan et al., 2011 |
pET22b(+) | IPTG inducible vector | Invitrogen |
pET26b(+) | IPTG inducible vector | Invitrogen |
pDR01 | sadA gene in the NdeI-EcoRI sites of pET22b(+) | Raghunathan et al., 2011 |
pET26b-SadA | sadA gene in the NdeI-EcoRI sites of pET26b(+) | This study |
pIBA2C | Anhydrotetracycline inducible vector. | IBA Lifesciences |
pIBA2-YadA | yadA gene in AHTC-inducible expression vector pASK-IBA2 | Grosskinsky et al., 2007 |
pIBA2C-YadA | yadA gene in the XbaI-SalI sites of pASK-IBA2C | This study |