Table 7. Top-ten biological functions identified by significant enrichment GO analysis in monkey and human PBMCs after LPS stimulation.
GO term (biological process) | P value# | DEGs* (2 μg/mL LPS) | DEGs (10 μg/mL LPS) |
---|---|---|---|
Human | |||
Antigen processing and presentation of peptide or polysaccharide antigen via MHC class IIф | 0 | 11 | 13 |
Interferon-gamma-mediated signaling pathway | 1.11×10–16 | 14 | 23 |
Immune responseф | 3.33×10–16 | 32 | 53 |
Cytokine-mediated signaling pathway | 1.11×10–16 | 19 | 33 |
Chemotaxis | 1.11×10–11 | 13 | 21 |
T cell co-stimulation | 5.18×10–11 | 11 | 16 |
Inflammatory response | 1.58×10–10 | 17 | 2 |
T cell receptor signaling pathway | 2.89×10–9 | 11 | 15 |
Innate immune response | 9.11×10–8 | 13 | 23 |
Platelet degranulation | 3.13×10–7 | 6 | 13 |
△Phagocytosis, recognition | △2.60×10–6 | 3 | 3 |
△Positive regulation vascular endothelial growth factor production | △1.08×10–5 | 4 | 5 |
Monkey | |||
Antigen processing and presentation of peptide antigen via MHC Class I | −2.22×10–16 | 13 | 13 |
Antigen processing and presentation | 0 | 22 | 23 |
Immune responseф | 8.88×10–16 | 30 | 33 |
Antigen processing and presentation of peptide or polysaccharide antigen via MHC class IIф | 2.83×10–9 | 6 | 6 |
Chaperone-mediated protein folding requiring cofactor | 0.00015 | 3 | 3 |
Sarcomere organization | 0.00028 | 3 | 3 |
Positive chemotaxis | 0.00061 | 2 | 3 |
Cellular iron ion homeostasis | 0.00092 | 0 | 3 |
Aerobic respiration | 0.00148 | 1 | 2 |
Antigen processing and presentation of exogenous peptide antigen via MHC Class II | 0.00148 | 2 | 2 |
△Electron transport chain | △0.00017 | 4 | 3 |
△Translation | △0.00125 | 9 | 8 |
△ATP synthesis coupled electron transport | △0.00150 | 2 | 2 |
*, DEGs: number of differently expression genes identified by microarray in 2 or 10 μg/mL LPS groups; #, P value for enrichment; △, that means these top-ten GO terms are identified in 2 μg/mL LPS group; ф, the same GO terms used in both human and monkey groups.