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. 2021 Jan 18;104(3):1106–1110. doi: 10.4269/ajtmh.19-0872

Table 2.

Genotype constellation of RV RVA/Bat-wt/NGA/59/2011/GXP[2] and strains with the most closely related segments

Gene Nucleotide length Genotype of RV59* Strains with the most closely related segments Nucleotide identity (%)
VP4 1,716 P[2] P[2]-RVA/Human-tc/KEN/B10/1987/G3P2 84.5
VP6 1,031 I16 I16-RVA/Human-tc/KEN/B10/1987/G3P2 92.6
VP1 2,982 R8 R8-BatRVA322/Taphozous mauritianus/KEN/Kwale/2015 91.0
R8-RVA/Human-tc/KEN/B10/1987/G3P2 88.9
VP2 2,670 C3 C3-Equine RV A strain RVA/Horse-wt/ARG/E3198/2008/G3P[3] 96.9
VP3 2,209 M5 M5-RVA/Simian-lab/USA/SA11-tsC-606/1982/G3P[2] 91.7
M5-RVA/Human-tc/KEN/B10/1987/G3P2 89.2
NSP1 1,455 A35 A12-RVA/Human-tc/THA/T152/1998/G12P9 56.6
NSP2 471 N3 N3-Equine RV A strain RVA/Horse-wt/ARG/E3198/2008/G3P[3] 95.9
NSP3 865 T3 T3-Equine RV A strain RVA/Horse-wt/ARG/E3198/2008/G3P[3] 96.0

RV = rotavirus.

*

Based on the RV Classification Working Group recommendation.

Based on the NCBI BlastN search or sequence alignment comparison.