Table 2.
Habitat | Elevation code | Valid reads | Observed OTUs | Chao1 | Simpson evenness | Simpson diversity (1/D) | Goods Coverage (%) |
---|---|---|---|---|---|---|---|
Forest soils | UL | 23,183 ± 3,813 | 228 ± 21a | 243 ± 27a | 0.964 ± 0.001ab | 27.9 ± 0.9a | 99.1 |
LL | 19,552 ± 3,244 | 297 ± 37b | 310 ± 36b | 0.974 ± 0.005a | 39.4 ± 7.6b | 99.7 | |
ML | 19,818 ± 3,441 | 338 ± 76b | 347 ± 77b | 0.975 ± 0.008a | 44.3 ± 15.2b | 99.8 | |
Sugarcane farm soil | SC | 22,881 ± 3,842 | 248 ± 41ab | 264 ± 47a | 0.959 ± 0.007b | 24.9 ± 3.8a | 99.4 |
p-value | 0.310 | 0.019 | 0.037 | 0.004 | 0.011 | 0.465 |
Sample comparison for diversity indices (OTUs, Chao1, Simpson evenness and diversity) were performed using rarefied datasets of 16,708 sequences representing the lowest number of reads in a sample. One-factor ANOVA was carried out to compare the sampling sites and post hoc (Tukey’s) tests applied. Different superscript letters within a column indicate significant differences at p ≤ 0.05.