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. 2021 Feb 24;12:592725. doi: 10.3389/fmicb.2021.592725

Table 2.

Summary of OTU richness diversity indices of bacterial taxa in different forest landscape and adjacent sugar cane plantations.

Habitat Elevation code Valid reads Observed OTUs Chao1 Simpson evenness Simpson diversity (1/D) Goods Coverage (%)
Forest soils UL 23,183 ± 3,813 228 ± 21a 243 ± 27a 0.964 ± 0.001ab 27.9 ± 0.9a 99.1
LL 19,552 ± 3,244 297 ± 37b 310 ± 36b 0.974 ± 0.005a 39.4 ± 7.6b 99.7
ML 19,818 ± 3,441 338 ± 76b 347 ± 77b 0.975 ± 0.008a 44.3 ± 15.2b 99.8
Sugarcane farm soil SC 22,881 ± 3,842 248 ± 41ab 264 ± 47a 0.959 ± 0.007b 24.9 ± 3.8a 99.4
p-value 0.310 0.019 0.037 0.004 0.011 0.465

Sample comparison for diversity indices (OTUs, Chao1, Simpson evenness and diversity) were performed using rarefied datasets of 16,708 sequences representing the lowest number of reads in a sample. One-factor ANOVA was carried out to compare the sampling sites and post hoc (Tukey’s) tests applied. Different superscript letters within a column indicate significant differences at p ≤ 0.05.