Table 3.
Most highly common differentially upregulated and downregulated proteins in LGG
| Upregulated protein | Protein ID | p value | Log2FC | Protein description |
| CCE29_04955 | A0A1Y0DVK9 | 2.40E-05 | 1.76 | Pilus assembly protein |
| LRHMDP2_922 | K8QM21 | 4.30E-05 | 1.15 | NADPH:quinine reductase related Zn-dependent oxidoreductase |
| CCE29_07950 | A0A1Y0DXE7 | 9.90E-05 | 2.01 | Iron-sulfur cluster biosynthesis family protein |
| AAULR_10650 | F3N0G5 | 1.11E-04 | 3.68 | Membrane protein |
| CCE29_03735 | A0A2A5L8F8 | 1.23E-04 | 4.07 | ABC transporter substrate-binding protein |
| CCE29_04965 | A0A1Y0DVP1 | 2.67E-04 | 2.78 | Pilus assemble protein |
| N507_1524 | A0A249N5Y8 | 6.08E-04 | 0.80 | Uncharacterized protein |
| LRHMDP2_518 | K8QF03 | 7.93E-04 | 1.54 | Uncharacterized protein |
| purD | A0A1Y0DZS2 | 1.60E-03 | 1.79 | Phosphoribosylamine-glycine ligase |
| purM | A0A1Y0DZP0 | 1.63E-03 | 1.79 | Phosphoribosylfomyglycinamidine cyclo-ligase |
| Downregulated protein | Protein ID | p value | Log2FC | Protein description |
| rpoC | K8QEG2 | 8.00E-06 | −0.55 | DNA-directed RNA polymerase subunit beta′ |
| secA | A0A249DE52 | 9.30E-05 | −0.87 | Protein translocase subunit SecA |
| murB | A0A3S4R547 | 2.81E-04 | −2.82 | UDP-N-acetylenolpyruvoylglucosa mine reductase |
| murF | A0A2A5L3G4 | 3.21E-04 | −0.82 | UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase |
| rplV | K8Q8J1 | 3.43E-04 | −0.96 | 50S ribosomal protein L22 |
| ddl | A0A1Y0DWH7 | 3.73E-04 | −1.54 | D-alanine-D-alanine ligase |
| LRHMDP2_1796 | K8Q7G6 | 4.26E-04 | −2.21 | 6-phospho-beta-glucosidase |
| N507_1229 | A0A249N444 | 4.62E-04 | −2.42 | 50S ribosomal protein L16 |
| ackA | K8Q7E5 | 8.56E-04 | −0.64 | Acetate kinase |
| lpdA | A0A1Y0DTI9 | 1.75E-03 | −1.08 | Outer membrane protein A |