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. 2021 Mar 10;16(3):e0247314. doi: 10.1371/journal.pone.0247314

Fig 4. Phylogenetic tree analysis of CHIKV whole genome.

Fig 4

Phylogenetic reconstruction of CHIKV whole-genome generated using the Maximum-Likelihood method with 1,000 ultrafast bootstrap replicates. Bootstrap values are represented at the branch nodes. The three major genotypes of CHIKV are highlighted in different colors. CHIKV strains isolated from this study are shown in red text (GenBank accession numbers MT495605-MT495608, MT640255, and MT640256). Bold lines in different colors show the specific amino acid substitutions in E2 and E1.