TABLE 4.
RW group | WGW group | Within RW | Within WGW | Group comparison | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Pathway name | Pathway number | Baseline relative abundance, % | Δ Relative abundance after 12 wk, % | Baseline relative abundance, % | Δ Relative abundance after 12 wk, % | P value | FDR P value | P value | FDR P value | P value | FDR P value |
Superpathway of hexitol degradation | HEXITOLDEGSUPER.PWY | 0.13 ± 0.049 | −0.015 ± 0.056 | 0.13 ± 0.065 | −0.00 ± 0.056 | 0.70 | NS2 | 0.97 | NS | 0.044 | NS |
Pantothenate and coenzyme A biosynthesis | PANTOSYN.PWY | 0.58 ± 0.057 | 0.022 ± 0.039 | 0.55 ± 0.054 | 0.00 ± 0.034 | 0.11 | NS | 0.76 | NS | 0.022 | NS |
Acetyl-CoA fermentation to butyrate II | PWY.5676 | 0.26 ± 0.079 | −0.026 ± 0.081 | 0.23 ± 0.062 | 0.035 ± 0.059 | 0.12 | NS | 0.017 | NS | 0.031 | NS |
Pyruvate fermentation to acetone | PWY.6588 | 0.28 ± 0.12 | −0.044 ± 0.12 | 0.20 ± 0.087 | 0.017 ± 0.068 | 0.32 | NS | 0.18 | NS | 0.043 | NS |
Aromatic biogenic amine degradation | PWY.7431 | 0.010 ± 0.010 | 0.00 ± 0.010 | 0.010 ± 0.010 | 0.0059 ± 0.012 | 0.30 | NS | 0.56 | NS | 0.047 | NS |
l-Alanine biosynthesis | PWY0.1061 | 0.36 ± 0.13 | −0.067 ± 0.16 | 0.32 ± 0.10 | −0.010 ± 0.12 | 0.30 | NS | 0.55 | NS | 0.041 | NS |
l-Arginine degradation II | AST.PWY | 0.0048 ± 0.010 | 0.00 ± 0.011 | 0.010 ± 0.023 | −0.00 ± 0.012 | 0.048 | NS | 0.23 | NS | 0.15 | NS |
l-Lysine biosynthesis I | DAPLYSIESYN.PWY | 0.77 ± 0.10 | −0.065 ± 0.14 | 0.75 ± 0.079 | −0.030 ± 0.079 | 0.041 | NS | 0.15 | NS | 0.82 | NS |
(Kdo)2-lipid A biosynthesis | KDO.NAGLIPASYN.PWY | 0.024 ± 0.036 | −0.010 ± 0.045 | 0.024 ± 0.045 | 0.010 ± 0.027 | 0.043 | NS | 0.28 | NS | 0.50 | NS |
Pyruvate fermentation to acetate and lactate II | PWY.5100 | 0.94 ± 0.14 | −0.049 ± 0.086 | 0.91 ± 0.084 | −0.020 ± 0.071 | 0.049 | NS | 0.79 | NS | 0.13 | NS |
PreQ0 biosynthesis | PWY.6703 | 0.32 ± 0.063 | 0.057 ± 0.077 | 0.31 ± 0.054 | 0.021 ± 0.044 | 0.046 | NS | 0.82 | NS | 0.95 | NS |
Vitamin K-2 biosynthesis | PWY.5845 | 0.023 ± 0.029 | 0.00 ± 0.038 | 0.025 ± 0.039 | 0.0022 ± 0.025 | 0.19 | NS | 0.037 | NS | 0.52 | NS |
Superpathway of ubiquinol-8 biosynthesis | UBISYN.PWY | 0.025 ± 0.023 | 0.00 ± 0.022 | 0.028 ± 0.028 | 0.0013 ± 0.021 | 0.61 | NS | 0.024 | NS | 1.0 | NS |
Values are presented as group means ± SD, n = 16 (RW) or n = 21 (WGW). FDR, false discovery rate; PWY, pathway; RW, refined wheat; WGW, whole grain wheat; Δ, differential change over time.
2NS, nonsignificant: P value >0.05.