hPSC cell lines |
H1 hESCs |
Wicell |
RRID: CVCL_9771 |
H9 hESCs |
Wicell |
RRID: CVCL_9773 |
SC102A-1 hiPSCs |
Systems Biosciences |
RRID: CVCL_IT66 |
Antibodies and staining reagents |
Anti-KRT7 |
Santa Cruz Biotechnology |
Cat#sc-23876, RRID:AB_2265604
|
Anti-KRT7 |
Cell Signaling Technologies |
Cat# 4465, RRID:AB_11178382
|
Anti-hCG |
Abcam |
Cat# ab9582, RRID:AB_296507
|
Anti-hCG |
Abcam |
Cat# ab9376, RRID:AB_307221
|
Anti-P63 |
Cell Signaling Technologies |
Cat# 13,109, RRID:AB_2637091
|
Anti-GATA3 |
Cell Signaling Technologies |
Cat# 5852, RRID:AB_10835690
|
Anti-TFAP2C |
Cell Signaling Technologies |
Cat# 2320, RRID:AB_2202287
|
Anti-YAP |
Cell Signaling Technologies |
Cat# 4912, RRID:AB_2218911
|
Anti-TEAD4 |
Abcam |
Cat# ab58310, RRID:AB_945789
|
Anti-CDX2 |
Abcam |
Cat# ab76541, RRID:AB_1523334
|
Anti-VE-Cadherin |
Cell Signaling Technologies |
Cat# 2500, RRID:AB_10839118
|
Anti-HLA-G |
Abcam |
Cat# ab52455, RRID:AB_880552
|
Anti-Syncytin |
Santa Cruz Biotechnology |
Cat# sc-50369, RRID:AB_2101536
|
Rabbit Polyclonal IgG |
R&D Systems |
Cat# AB-105-C, RRID:AB_354266
|
Rabbit XP IgG |
Cell Signaling Technologies |
Cat# 3900, RRID:AB_1550038
|
Mouse IgG1 |
Abcam |
Cat# ab18447, RRID:AB_2722536
|
Mouse IgG2a |
Abcam |
Cat# 554126, RRID:AB_479661
|
Alexa Fluor 488–conjugated anti-rabbit IgG |
Thermo Fisher Scientific |
Cat# A-11034, RRID:AB_2576217
|
Alexa Fluor 647–conjugated anti-rabbit IgG |
Thermo Fisher Scientific |
Cat# A-21052, RRID:AB_2535719
|
DAPI |
R&D Systems |
Cat#5748 |
CellMask deep red plasma membrane stain |
Invitrogen |
Cat#C10046
|
Chemicals, Peptides, and Recombinant Proteins |
TrypLE |
Thermo Fisher Scientific |
Cat#12604013 |
Vitronectin |
Thermo Fisher Scientific |
Cat#A14700 |
Laminin 521 |
Stem Cell Technologies |
Cat#77003 |
Human FGF-10 |
Stem Cell Technologies |
Cat#78037 |
TeSR-E8 |
Stem Cell Technologies |
Cat#05990 |
TeSR-E7 |
Stem Cell Technologies |
Cat#05914 |
TeSR-E6 |
Stem Cell Technologies |
Cat#05946 |
ReLeSR |
Stem Cell Technologies |
Cat#05872 |
Sphingosine-1-phosphate |
Tocris |
Cat#1370 |
D-erythro-dihydrosphingosine-1-phosphate |
Abcam |
Cat#ab141750 |
SB431542 |
Tocris |
Cat#1614 |
BMP4 |
Thermo Fisher Scientific |
Cat#PHC9534 |
CYM5442 hydrochloride |
Tocris |
Cat#3601 |
CYM5520 |
Tocris |
Cat#5418 |
CYM5541 |
Tocris |
Cat#4897 |
Y-27632 dihydrochloride |
Tocris |
Cat#1254 |
EGF |
R&D Systems |
Cat#236-EG |
Doxycycline hyclate |
Tocris |
Cat#4090 |
Puromycin dihydrochloride |
Tocris |
Cat#4089 |
Activin A |
R&D Systems |
Cat#338-AC |
Greiner Bio-one Cell View glass plates |
Greiner Bio-one |
Cat#627965 |
4% Paraformaldehyde in PBS |
Thermo Fisher Scientific |
Cat#R37814
|
Triton X-100 |
Sigma |
Cat#T8787 |
PBS w/o CaMg |
Sigma |
Cat#D5773 |
PBS w/CaMg |
Sigma |
Cat#D8662 |
Human IgG |
Immunoreagents |
Cat#Hu-003-C |
BSA |
Fisher Scientific |
Cat#BP9703 |
10% BSA fatty acid free in PBS |
Sigma |
Cat#A1595 |
VPA |
Sigma |
Cat#P6273 |
A83–01 |
Tocris |
Cat#2939 |
2-mercaptoethanol |
Sigma |
Cat#M3148 |
FBS |
Thermo Fisher Scientific |
Cat#16141–061 |
DMEM/F12 |
Thermo Fisher Scientific |
Cat#11320033 |
ITS-X |
Thermo Fisher Scientific |
Cat#51500–056 |
L-ascorbic acid |
Sigma |
Cat#A8960 |
Pen/Strep |
Thermo Fisher Scientific |
Cat#15140122 |
Forskolin |
Tocris |
Cat#1099 |
Neuregulin |
Cell Signaling Technologies |
Cat#5218SC |
Matrigel |
Corning |
Cat#354234 |
KSR |
Thermo Fisher Scientific |
Cat#10828028 |
Trizol Reagent |
Thermo Fisher Scientific |
Cat#15596018 |
DEPC |
Sigma |
Cat#95284 |
Baseline Zero DNAase Kit |
VWR |
Cat#76081–624 |
Oligo-dT |
IDT |
Cat#51–01–15–07 |
dNTP mix |
Thermo Fisher Scientific |
Cat#10297018 |
Superscript II RT |
Thermo Fisher Scientific |
Cat#18064014 |
SYBR Green Supermix |
Bio-rad |
Cat#1725272 |
Methanol |
Fisher Scientific |
Cat#A412–500 |
Acetone |
Fisher Scientific |
Cat#A18–500 |
Critical Commercial Kits |
GeneJET RNA Purification Kit |
Thermo Fisher Scientific |
Cat#K0731 |
Oligonucleotides |
|
|
qPCR Primers |
IDT |
Methods S1 for primer sequences |
Software and Algorithms |
R (v3.6.0) |
http://www.R-project.org/ |
N/A |
DESeq2 package (v1.22.2) |
|
|
PCR package (v1.2.2) |
|
|
SAS Software |
|
N/A |
Zeiss Zen Software |
https://www.zeiss.com/microscopy/us/products/microscope-software/zen-lite.html |
N/A |