Table 4.
Enzyme | Status | Final AA | Heptose | Man. P4’ |
Man. P1’ |
Expectation |
---|---|---|---|---|---|---|
GFS | WT | H179 C109 | n/a | n/a | Normal substrate | Catalytic dyad serving as general acid and base for epimerization at C3 and C5. |
MlghC | WT | R180 Y108 | P4γ to P5γ | PI + PIII | PII | Catalytic dyad |
DdahC | WT | H180 T110 | P4α to P5α | PIII | PII | Catalytic dyad |
DdahC | T110C | H180 C110 | P4α to P5α ↑↑ |
PIII = |
PII = |
GFS-like dyad. Enhanced mannose usage, especially nonepimerized P1’. |
DdahC | H180R | R180 T110 | P4α to P5α = |
PIII = |
PII ↑↑↑ |
Intermediate toward MlghC dyad. Switch of heptose epimer specificity to P4γ and decreased mannose usage. |
DdahC | H180R T110Y | R180 Y110 | Inactive | PIII = |
PII = |
MlghC-like dyad. Switch of heptose epimer specificity to P4γ and decreased mannose usage. |
↓, modest decrease in enzymatic activity; =, no change in enzymatic activity; ↑ to ↑↑↑, moderate to strong increase in enzymatic activity; Heptose: heptose-based substrates; Man., mannose-based substrates; n/a, not applicable.
Final AA refers to the amino acids present at the site of interest in the WT or mutated enzyme.
Status refers to either WT or mutated enzyme.
Data under columns Heptose, Man. P4’, and Man. P1’ show observed catalytic activity, which differed from original expectations.