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. 2020 Dec 18;203(2):e00300-20. doi: 10.1128/JB.00300-20

TABLE 1.

HOCl-sensitive regulatory gene mutants

PA14 locus tag and gene namea PAO1 locus tag Protein description P value for mutant OD600 vs WT OD600 at set time pointsb
20 h 22 h 24 h
PA14_07110 sahR PA0547 ArsR family transcriptional regulator 0.0420 0.0003 <0.0001
PA14_08780 rpoC PA4269 DNA-directed RNA polymerase β chain 0.0280 0.0002 <0.0001
PA14_13660 tpbA PA3885 Protein tyrosine phosphatase 0.0522 0.0006 0.0005
PA14_17900 metR PA3587 LysR family transcriptional regulator 0.0342 0.0002 <0.0001
PA14_20730 flgM (1) PA3351 Flagellar biosynthesis anti-sigma-28 factor 0.0288 0.0002 <0.0001
PA14_20730 flgM (2) PA3351 Flagellar biosynthesis anti-sigma-28 factor 0.0299 0.0001 <0.0001
PA14_22370 (2) PA3233 Hypothetical protein, cyclic nucleotide-binding domain 0.0274 0.0002 <0.0001
PA14_29740 PA2656 Two-component sensor 0.2349 0.0427 0.0214
PA14_32410 mexT PA2492 LysR family transcriptional regulator of multidrug efflux 0.0370 0.0002 <0.0001
PA14_45950 rsaL PA1431 Regulatory protein 0.1666 0.0367 0.0385
PA14_52570 rsmA PA0905 Posttranscriptional global regulator 0.0340 0.0003 <0.0001
PA14_56620 pyeR (2) PA4354 ArsR family transcriptional regulator 0.0396 0.0010 0.0068
PA14_60860 nfxB PA4600 TetR family transcriptional regulator of multidrug efflux 0.0515 0.0049 0.0235
PA14_62490 dksA PA4723 RNA polymerase-binding transcription factor 0.0088 0.0006 0.0018
PA14_68680 envZ (3) PA5199 Two-component sensor 0.0494 0.0082 0.0714
PA14_70570 recGc PA5345 ATP-dependent DNA helicase 0.0053 <0.0001 <0.0001
a

Mutants were identified as HOCl sensitive by visual inspection (increased lag of >3 h compared to the WT) and statistical analysis of growth. The numbers in parentheses next to some of the gene mutants correspond to genes that have more than one mutant strain in the transposon library (Table S1).

b

Statistical analysis performed on two biological replicates. P values were determined by one-way analysis of variance with Dunnett’s multiple-comparison test.

c

recG is not a regulatory mutant per se but is on the same operon as oxyR, which encodes the H2O2-sensing transcriptional regulator; the transposon mutant in oxyR was not recoverable.