TABLE 1.
PA14 locus tag and gene namea | PAO1 locus tag | Protein description |
P value for mutant OD600 vs WT OD600 at set time pointsb
|
||
---|---|---|---|---|---|
20 h | 22 h | 24 h | |||
PA14_07110 sahR | PA0547 | ArsR family transcriptional regulator | 0.0420 | 0.0003 | <0.0001 |
PA14_08780 rpoC | PA4269 | DNA-directed RNA polymerase β chain | 0.0280 | 0.0002 | <0.0001 |
PA14_13660 tpbA | PA3885 | Protein tyrosine phosphatase | 0.0522 | 0.0006 | 0.0005 |
PA14_17900 metR | PA3587 | LysR family transcriptional regulator | 0.0342 | 0.0002 | <0.0001 |
PA14_20730 flgM (1) | PA3351 | Flagellar biosynthesis anti-sigma-28 factor | 0.0288 | 0.0002 | <0.0001 |
PA14_20730 flgM (2) | PA3351 | Flagellar biosynthesis anti-sigma-28 factor | 0.0299 | 0.0001 | <0.0001 |
PA14_22370 (2) | PA3233 | Hypothetical protein, cyclic nucleotide-binding domain | 0.0274 | 0.0002 | <0.0001 |
PA14_29740 | PA2656 | Two-component sensor | 0.2349 | 0.0427 | 0.0214 |
PA14_32410 mexT | PA2492 | LysR family transcriptional regulator of multidrug efflux | 0.0370 | 0.0002 | <0.0001 |
PA14_45950 rsaL | PA1431 | Regulatory protein | 0.1666 | 0.0367 | 0.0385 |
PA14_52570 rsmA | PA0905 | Posttranscriptional global regulator | 0.0340 | 0.0003 | <0.0001 |
PA14_56620 pyeR (2) | PA4354 | ArsR family transcriptional regulator | 0.0396 | 0.0010 | 0.0068 |
PA14_60860 nfxB | PA4600 | TetR family transcriptional regulator of multidrug efflux | 0.0515 | 0.0049 | 0.0235 |
PA14_62490 dksA | PA4723 | RNA polymerase-binding transcription factor | 0.0088 | 0.0006 | 0.0018 |
PA14_68680 envZ (3) | PA5199 | Two-component sensor | 0.0494 | 0.0082 | 0.0714 |
PA14_70570 recGc | PA5345 | ATP-dependent DNA helicase | 0.0053 | <0.0001 | <0.0001 |
Mutants were identified as HOCl sensitive by visual inspection (increased lag of >3 h compared to the WT) and statistical analysis of growth. The numbers in parentheses next to some of the gene mutants correspond to genes that have more than one mutant strain in the transposon library (Table S1).
Statistical analysis performed on two biological replicates. P values were determined by one-way analysis of variance with Dunnett’s multiple-comparison test.
recG is not a regulatory mutant per se but is on the same operon as oxyR, which encodes the H2O2-sensing transcriptional regulator; the transposon mutant in oxyR was not recoverable.