Table 3. Sequenced genomes of 5 viruses belonging to Nairoviridae (Orthonairovirus).
Sequence status* | Virus | Abbreviation | Strain (Passage**) | Serogroup | Collection Date | Collection Country*** | Isolation Source**** | Original Virus Description | GenBank Accession |
---|---|---|---|---|---|---|---|---|---|
4 | Estero Real | ERV | K 329 (P3SM1) | Ungrouped | 1980 | Cuba | Argasid tick | [126] | MK896577 –MK896579 |
2 | Hughes | HUGV | Dry Tortugas (P15SM2) | Hughes | 1962 | USA | Argasid tick | [127] | MK896561 –MK896563 |
4 | Sapphire II | SAPV | 75V8196 (P4SM1) | Hughes | 1975 | USA | Argasid tick | [128] | MK896466 –MK896468 |
1 | Wanowrie | WANV | Ig 700 (P7SM1) | Ungrouped | 1954 | India | Ixodid tick | [58,60] | MK896436 –MK896438 |
4 | Yogue | YOGV | DakAnD 5634 (P7SM1) | Yogue | 1968 | Senegal | Bat | [58] | MK896427 –MK896429 |
* Sequence status as of October 3, 2019
1 = Completely new genome sequence
2 = New strain sequence information
3 = Addition of missing genome segments or coding complete segments
4 = Sequence information already existed. In almost all of these cases, sequences were deposited by other authors during the course of this study.
** Passage number as defined in ARC metadata
*** Currently-recognized country names
**** Based on ARC metadata compiled by the CDC