TABLE 4.
The read assignment to Bifidobacterium species in whole genome metagenome sequencing and analysis for three paired (age and sex matched) CA/GU-Hp+ vs. NUD/GAS-Hp+ subjects.
| CA/GU-Hp+ | NUD/GAS-Hp+ | CA/GU-Hp+ | NUD/GAS-Hp+ | CA/GU-Hp+ | NUD/GAS-Hp+ | |
| Species | TMC99 | TMC110 | TMC163 | TMC125 | TMC154 | TMC120 |
| Bifidobacterium adolescentis | 0 | 29 | 0 | 202 | 0 | 644 |
| Bifidobacterium bifidum | 0 | 47 | 0 | 0 | 0 | 37 |
| Bifidobacterium breve | 38 | 10,152 | 0 | 0 | 0 | 47 |
| Bifidobacterium dentium | 0 | 0 | 0 | 0 | 366 | 0 |
| Bifidobacterium longum | 0 | 1,078 | 0 | 325 | 27 | 1,350 |
| Bifidobacterium moukalabense | 0 | 0 | 0 | 0 | 39 | 0 |
| Bifidobacterium pseudocatenulatum | 0 | 0 | 0 | 74 | 0 | 0 |
| Bifidobacterium reuteri | 0 | 52 | 0 | 0 | 0 | 0 |
| Total | 38 | 11,358 | 0 | 601 | 432 | 2,078 |