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. 2021 Mar 12;20:68. doi: 10.1186/s12934-021-01551-0

Table 1.

Strains and plasmids used in this study

Strain Genotype Source
E. coli BW25113/F׳ rrnBT14 ΔlacZWJ16 hsdR514 ΔaraBADAH33 ΔrhaBADLD78 [F׳ proAB lacIqZΔM15 Tn10 (Tetr)] CGSC
FA09 E. coli BW25113/F׳, ΔfadR, PCPA1-fadD, P119-fadL, ΔsthA, PCPA1-pntAB [28]
CC1 FA09, ΔpoxB:: Pfrd3-AT4CL1 This study
CC2 CC1, ΔfabB:: P119-BT-CA This study
CC3 CC2, Pfrd3-pntAB This study
CR1 E. coli BW25113/F׳ carrying pLB1a-RB and pYB1s- 4CL This study
CR2 E. coli BW25113/F carrying pYB1s-RB and pLB1a-4CL This study
CR3 E. coli BW25113/F׳ carrying pLB1a-RB4 This study
CR4 E. coli BW25113/F׳ carrying pYB1s-RB4 This study
CR5 FA09 carrying pYB1s-RB4 This study
CR6 CC1 carrying pYB1s-RB4 This study
CR7 CC2 carrying pYB1s-RB4 This study
CR8 CC3 carrying pYB1s-RB4 This study
Plasmid Description Source
pLB1a araBAD promoter, R6k ori, Ampr Our laboratory
pYB1s araBAD promoter, p15A ori, Strr Our laboratory
pKD46 Temperature-sensitive vector carrying Red recombinase, Ampr [42]
pSB1s-Cre Temperature-sensitive vector carrying Cre recombinase, Strr Our laboratory
pCP20 Temperature-sensitive vector carrying FLP recombinase, Ampr [42]
pLB1a-RB pLB1a containing Rubus idaeus RZS1 gene and Rheum palmatum BAS gene This study
pLB1a-4CL pLB1a containing Arabidopsis thaliana 4CL1 gene This study
pYB1s-RB pYB1s containing Rubus idaeus RZS1 gene and Rheum palmatum BAS gene This study
pYB1s- 4CL pYB1s containing Arabidopsis thaliana 4CL1 gene This study
pLB1a-RB4 pLB1a containing Rubus idaeus RZS1 gene, Rheum palmatum BAS gene and Arabidopsis thaliana 4CL1 gene This study
pYB1s-RB4 pYB1s containing Rubus idaeus RZS1 gene, Rheum palmatum BAS gene and Arabidopsis thaliana 4CL1 gene This study
pYfrd11s-GFP frd1 promoter, p15A ori, Strr, GFP gene This study
pYfrd21s-GFP frd2 promoter, p15A ori, Strr, GFP gene This study
pYfrd31s-GFP frd3 promoter, p15A ori, Strr, GFP gene This study
pYfrd41s-GFP frd4 promoter, p15A ori, Strr, GFP gene This study