Skip to main content
. 2021 Mar 12;16(3):e0248556. doi: 10.1371/journal.pone.0248556

Table 3. The long repeat sequences detected in E. sativa cp genome.

No. Repeat Type Repeat 1 Start (bp) Repeat 2 Start (bp) Region
1 30 P 61768 61768 LSC
2 30 P 7627 44148 LSC
3 30 F 106858 106890 IRB
4 30 P 106858 129922 IRB; SSC
5 30 P 106890 129954 IRB; SSC
6 32 P 6262 6262 LSC
7 34 F 106854 106886 IRB
8 34 P 106854 129922 IRB; SSC
9 34 P 106886 129954 IRB; SSC
10 34 F 129922 129954 SSC
11 35 P 75818 75818 LSC
12 35 P 64224 64224 LSC
13 36 P 9229 9229 LSC
14 36 P 35536 35536 LSC
15 37 F 97938 119515 IRB; SSC
16 37 P 119515 138867 SSC; IRA
17 39 F 43041 97935 LSC; IRB
18 39 P 43041 138868 LSC; IRA
19 40 P 28188 28188 LSC
20 40 P 75813 75818 LSC
21 40 F 148542 148563 IRA
22 41 P 35531 35536 LSC
23 42 F 97933 119510 IRB; SSC
24 42 P 119510 138867 SSC; IRA
25 44 P 73307 73307 LSC
26 44 R 35505 35505 LSC
27 44 P 76826 76826 LSC
28 44 P 62009 62009 LSC
29 45 P 112907 112907 SSC
30 47 F 88239 88260 IRB
31 47 P 88239 148535 IRB; IRA
32 47 P 88260 148556 IRB; IRA
33 47 F 148535 148556 IRA
34 49 P 29704 29704 LSC
35 49 C 35518 35519 LSC
36 49 P 55354 55354 LSC
37 50 P 185 185 LSC
38 52 F 37938 40162 LSC
39 55 F 37935 40159 LSC
40 55 P 66074 66074 LSC
41 56 P 179 185 LSC
42 58 F 37932 40156 LSC
43 73 F 37917 40141 LSC
44 74 F 37899 40123 LSC
45 76 F 37914 40138 LSC
46 77 F 37896 40120 LSC
47 81 F 37909 40133 LSC
48 82 F 37902 40126 LSC
49 85 F 37905 40129 LSC

Note: P represents for palindrome, R for reverse, F for forward, and C for complement types.