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. 2021 Mar 14;2(4):100229. doi: 10.1016/j.xcrm.2021.100229

Table 2.

Clinical outcomes and microorganisms detected

No bacterial superinfection (n = 26) Bacterial superinfection (n = 19) p value
Outcomes and superinfection data

Duration of ventilation (days) 8 (5.9–15.1) 37 (22.2–43.7) <0.001
Length of ICU stay (days) 9 (7.0–14.9) 39 (28.5–57.0) <0.001
Length of hospital stay (days) 17 (14.4–26.4) 44 (34.2–63.3) <0.001
Patients died 6 (23.1%) 4 (21.1%) 0.999
Patients with bacterial respiratory superinfection 0 (0%) 19 (100%)
Patients with superinfection detected in BAL 0 (0%) 6 (31.6%)
Patients with bloodstream infection 2 (7.7%) 9 (47.4%) 0.004
Patients with Aspergillus detection 2 (7.7%) 3 (15.8%) 0.636
Patients with yeast colonization 12 (46.2%) 17 (89.5%) 0.004
Patients with multidrug resistant (MDR) pathogens 0 (0%) 10 (52.6%) <0.001

Causative microorganisms

Microbiology of superinfections

Overall pathogen detection in TBS/BALa 83 375
Relevant pulmonary pathogen detection in TBS/BALa 0 (0%) 169 (45.1%)
Citrobacter freundii, koseri 0 (0%) 11 (2.9%)
Enterobacter cloacae 0 (0%) 14 (3.7%)
Escherichia coli 0 (0%) 2 (0.5%)
Klebsiella aerogenes 0 (0%) 7 (1.9%)
Klebsiella pneumoniae 0 (0%) 27 (7.2%)
Legionella pneumophila 0 (0%) 2 (0.5%)
Pseudomonas aeruginosa 0 (0%) 64 (17.1%)
Acinetobacter spp. 0 (0%) 2 (0.5%)
Burkholderia cepacia 0 (0%) 30 (8.0%)
Morganella morganii 0 (0%) 3 (0.8%)
Streptococcus pneumoniae 0 (0%) 2 (0.5%)
Streptococcus anginosus 0 (0%) 3 (0.8%)
Staphylococcus aureus 0 (0%) 2 (0.5%)

Microbiology of bloodstream infections

Overall 2/152 (1.3%) 12/303 (4.0%)
Citrobacter spp. 0 (0%) 2 (16.7%)
Enterococcus faecalis and E. faecium 1 (50%) 6 (50%)
Klebsiella aerogenes 0 (0%) 1 (8.3%)
Klebsiella pneumoniae 0 (0%) 1 (8.3%)
Moraxella spp. 1 (50%) 0 (0%)
Candida glabrata 0 (0%) 1 (8.3%)
Pseudomonas aeruginosa 0 (0%) 1 (8.3%)

Viral detection

Overall 2 9
Influenza A virus 0 (0%) 1 (11.1%)
Influenza B virus 0 (0%) 0 (0%)
Respiratory viruses, multiplex PCRb (n = 34) 0 (0%) 0 (0%)
Herpes simplex virus type 1 (HSV-1) (PCR in blood) 0 (0%) 5 (55.5%)
Herpes simplex virus type 2 (HSV-2) (PCR in blood) 0 (0%) 0 (0%)
Human herpesvirus 6 (HHV-6) (PCR in blood) 0 (0%) 2 (22.2%)
Cytomegalovirus (CMV) (PCR in blood) 1 (50%) 0 (0%)
Epstein-Barr virus (EBV) (PCR in blood) 1 (50%) 1 (11.1%)

The data are presented as median (95% confidence interval [CI] of median) or number and percentage (%). The two groups were compared using chi-square test/Fisher exact or the Mann-Whitney test as appropriate.

a

Overall detected microorganisms, including repetitive detection in the same patient

b

Multiplex PCR assay for respiratory syncytial virus (RSV) A/B; influenza A/B virus; adenovirus; coronaviruses 229E, HKU1, NL63, and OC43; human bocavirus; human metapneumovirus (hMPV); rhino/enterovirus; and parainfluenza virus 1-4