Table 2.
Cancer Types | Variable | CDK2 | CDK4 | CDK6 | STAT3 | ||||
---|---|---|---|---|---|---|---|---|---|
rho-Value | p-Value | rho-Value | p-Value | rho-Value | p-Value | rho-Value | p-Value | ||
BRCA | Purity | 0.173772 | 3.46 × 10−8 | 0.093476 | 0.003164 | −0.31833 | 7.21 × 10−25 | −0.10635 | 0.000779 |
B Cell | 0.122448 | 0.000125 | 0.08921 | 0.005264 | 0.240495 | 2.54 × 10−14 | 0.066812 | 0.036797 | |
CD8+ T Cell | 0.192216 | 1.41 × 10−9 | 0.032843 | 0.305355 | 0.391337 | 4.53 × 10−37 | 0.239179 | 3.65 × 10−14 | |
CD4+ T Cell | 0.140028 | 1.31 × 10−5 | 0.042232 | 0.190619 | 0.320767 | 1.85 × 10−24 | 0.233229 | 2.38 × 10−13 | |
Macrophage | 0.079207 | 0.012988 | −0.01619 | 0.612245 | 0.257793 | 2.19 × 10−16 | 0.25456 | 5.28 × 10−16 | |
Neutrophil | 0.233463 | 3.07 × 10−13 | 0.096267 | 0.002962 | 0.391841 | 2.93 × 10−36 | 0.313132 | 4.44 × 10−23 | |
Dendritic Cell | 0.169013 | 1.58 × 10−7 | 0.113947 | 0.00043 | 0.384255 | 8.01 × 10−35 | 0.202448 | 2.97 × 10−10 | |
GBM | Purity | 0.286993 | 2.19 × 10−9 | 0.430653 | 2.39 × 10−20 | 0.192757 | 7.15 × 10−5 | −0.16588 | 0.000652 |
B Cell | −0.05908 | 0.228103 | 0.01657 | 0.73552 | 0.02255 | 0.645725 | −0.00829 | 0.865847 | |
CD8+ T Cell | −0.03756 | 0.443695 | −0.04642 | 0.343759 | 0.138459 | 0.004568 | −0.14558 | 0.002851 | |
CD4+ T Cell | −0.05077 | 0.300396 | −0.02841 | 0.562404 | −0.0257 | 0.600353 | 0.277782 | 7.64 × 10−9 | |
Macrophage | −0.01146 | 0.815223 | −0.02026 | 0.679627 | −0.03727 | 0.447329 | 0.056771 | 0.246809 | |
Neutrophil | 0.089753 | 0.006772 | 0.052908 | 0.28049 | −0.16547 | 0.000683 | 0.175587 | 0.00031 | |
Dendritic Cell | 0.200704 | 3.58 × 10−5 | 0.023584 | 0.630667 | −0.12206 | 0.012513 | 0.43801 | 5.06 × 10−21 | |
HNSC | Purity | 0.229737 | 2.51 × 10−7 | 0.304761 | 4.69 × 10−12 | −0.06379 | 0.157308 | −0.01693 | 0.707708 |
B Cell | 0.110468 | 0.015902 | 0.124189 | 0.00667 | −0.21932 | 1.36 × 10−6 | 0.230367 | 3.75 × 10−7 | |
CD8+ T Cell | 0.092891 | 0.043236 | 0.07504 | 0.102739 | −0.25071 | 3.16 × 10−8 | 0.235486 | 2.14 × 10−7 | |
CD4+ T Cell | 0.299532 | 2.09 × 10−11 | 0.140472 | 0.002036 | 0.189753 | 2.86 × 10−5 | 0.456441 | 4.47 × 10−26 | |
Macrophage | 0.146554 | 0.001238 | 0.190636 | 2.47 × 10−5 | −0.013 | 0.775631 | 0.21852 | 1.24 × 10−6 | |
Neutrophil | 0.215968 | 1.84 × 10−6 | 0.021853 | 0.6333 | 0.082199 | 0.072281 | 0.346725 | 5.62 × 10−15 | |
Dendritic Cell | 0.253224 | 1.73 × 10−8 | 0.103755 | 0.00272 | 0.040238 | 0.378066 | 0.387553 | 1.01 × 10−18 | |
LIHC | Purity | 0.181946 | 0.000672 | 0.069596 | 0.196552 | −0.11342 | 0.034946 | −0.23257 | 1.24 × 10−5 |
B Cell | 0.397861 | 1.70 × 10−14 | 0.446746 | 2.80 × 10−18 | 0.077473 | 0.151618 | 0.167119 | 0.001869 | |
CD8+ T Cell | 0.300309 | 1.47 × 10−8 | 0.327963 | 5.11 × 10−10 | 0.024258 | 0.654848 | 0.128993 | 0.016998 | |
CD4+ T Cell | 0.423424 | 2.13 × 10−16 | 0.379031 | 3.39 × 10−13 | 0.062486 | 0.247738 | 0.348425 | 2.97 × 10−11 | |
Macrophage | 0.476735 | 9.42 × 10−21 | 0.51059 | 4.90 × 10−24 | 0.097956 | 0.070829 | 0.359076 | 8.16 × 10−12 | |
Neutrophil | 0.477554 | 4.69 × 10−21 | 0.368888 | 1.46 × 10−12 | 0.076032 | 0.158794 | 0.448825 | 1.67 × 10−18 | |
Dendritic Cell | 0.480477 | 4.86 × 10−21 | 0.482455 | 3.18 × 10−21 | 0.052521 | 0.334277 | 0.285271 | 8.68 × 10−08 | |
LUAD | Purity | 0.06579 | 0.144252 | 0.060096 | 0.182364 | −0.16182 | 0.000304 | 0.007492 | 0.868083 |
B Cell | −0.04115 | 0.366308 | −0.10408 | 0.022022 | −0.03669 | 0.420564 | 0.119856 | 0.008302 | |
CD8+ T Cell | 0.146119 | 0.001222 | 0.006762 | 0.881683 | 0.275158 | 6.57 × 10−10 | 0.128065 | 0.004647 | |
CD4+ T Cell | 0.071922 | 0.001145 | −0.09706 | 0.032783 | 0.146028 | 0.001275 | 0.167818 | 0.000208 | |
Macrophage | 0.03284 | 0.470574 | −0.01899 | 0.67652 | 0.207622 | 4.01 × 10−6 | 0.158864 | 0.000445 | |
Neutrophil | 0.27285 | 1.08 × 10−9 | 0.078989 | 0.082887 | 0.345911 | 5.06 × 10−15 | 0.219087 | 1.16 × 10−6 | |
Dendritic Cell | 0.134315 | 0.002949 | 0.021403 | 0.637169 | 0.208912 | 3.25 × 10−6 | 0.179555 | 6.64 × 10−5 | |
SKCM | Purity | 0.134716 | 0.003873 | 0.33632 | 1.42 × 10−13 | 0.208989 | 6.48 × 10−6 | −0.09559 | 0.040865 |
B Cell | −0.04378 | 0.355269 | 0.035404 | 0.454766 | 0.092088 | 0.051436 | 0.190704 | 4.85 × 10−5 | |
CD8+ T Cell | −0.025 | 0.601752 | −0.09342 | 0.050716 | 0.273715 | 5.76 × 10−9 | 0.325874 | 2.70 × 10−12 | |
CD4+ T Cell | −0.14917 | 0.001582 | −0.05216 | 0.271664 | 0.151926 | 0.00129 | 0.276917 | 2.71 × 10−9 | |
Macrophage | −0.28478 | 6.72 × 10−10 | −0.06167 | 0.190155 | 0.252014 | 5.42 × 10−8 | 0.32638 | 1.05 × 10−12 | |
Neutrophil | −0.18426 | 8.13 × 10−5 | −0.0556 | 0.238103 | 0.455928 | 1.39 × 10−24 | 0.500159 | 5.51 × 10−30 | |
Dendritic Cell | −0.08306 | 0.079749 | −0.00475 | 0.920327 | 0.188403 | 6.24 × 10−5 | 0.373995 | 2.97 × 10−16 |
Key: rho-value = purity-corrected partial Spearman’s rho value; p-value = statistical significance. SKCE: Skin cutaneous melanoma; LUAD: Lung adenocarcinoma; LIHC: Liver hepatocellular carcinoma; HNSC: Head and neck cancer; GBM: glioblastoma; BRCA: Breast invasive carcinoma.