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. 2021 Mar 2;118(10):e2024083118. doi: 10.1073/pnas.2024083118

Fig. 5.

Fig. 5.

(A) Energy (in kBT) along the steepest descent paths connecting a single starting structure with five adjacent structures, obtained through the DNEB method (Fig. 3 and SI Appendix). These results are after the simultaneous optimization of all 10 energy barriers (target energy barriers [in kBT] are shown in the legend). The observed energy barriers are within 0.3% of their targets. (B) The loss function after attempting to simultaneously control the dynamics of multiple transitions, as a function of the number of transitions. Due to the form of the loss function (Eq. 5), simultaneous control is successful when Lfinal0. In practice, when we obtain Lfinal<102, this can be further reduced by additional optimization with smaller learning rates, indicating that the transition dynamics can indeed be controlled to a desired precision. The data are colored according to the Hessian-based prediction discussed in the text: green (blue) data correspond to cases where we predicted that simultaneous control could be (could not be) obtained. (C) Histogram of Lfinal for all data shown in B.