Table 1.
Interaction Type | Amide atom* | Strength | ||
i | j | Two-way alpha value (cal⋅mol−1⋅molal−1⋅Å−4) | Relative to sp3C–sp3C | |
Aliphatic sp3C interactions: | sp3C | sp2C | −0.0103 ± 0.0005 | 2.6 |
sp3C | sp3C | −0.0039 ± 0.0001 | 1.0 | |
sp3C | sp2N | −0.0038 ± 0.0002 | 1.0 | |
sp3C | sp2O | 0.0108 ± 0.0005 | (2.8)† | |
Amide sp2C interactions: | sp2C | sp2O | −0.0139 ± 0.0038 | 3.6 |
sp2C | sp2C | −0.0111 ± 0.0033 | 2.9 | |
sp2C | sp3C | −0.0103 ± 0.0005 | 2.6 | |
sp2C | sp2N | 0.0018 ± 0.0013 | (0.5)† | |
Amide sp2O interactions: | sp2O | sp2C | −0.0139 ± 0.0038 | 3.6 |
sp2O | sp2N | −0.0108 ± 0.0017 | 2.8 | |
sp2O | sp3C | 0.0108 ± 0.0005 | (2.8)† | |
sp2O | sp2O | 0.0181 ± 0.0051 | (4.6)† | |
Amide sp2N interactions: | sp2N | sp2O | −0.0108 ± 0.0017 | 2.8 |
sp2N | sp3C | −0.0038 ± 0.0002 | 1.0 | |
sp2N | sp2C | 0.0018 ± 0.0013 | (0.5)† | |
sp2N | sp2N | 0.0034 ± 0.0006 | (0.9)† |
Labels i and j are interchangeable, so only 10 of the 16 two-way alpha values listed are unique.
Unfavorable interaction strengths (indicated by parentheses) are expressed relative to the magnitude of the sp3C–sp3C interaction.