Table 2.
Summary of repeats within the reniform nematode genome using the REPLI-g library.
| Type of element | No. of elements | Length occupied (bp) |
|---|---|---|
| Retroelements | 50 | 5682 |
| L2/CRI/Rex (LINEs) | 8 | 608 |
| BEL/Pao (LTR) | 6 | 305 |
| Gypsy/DIRS1 (LTR) | 36 | 4769 |
| DNA transposons | 70 | 5188 |
| Hobo-activator | 10 | 829 |
| Tc1-IS630-Pogo | 47 | 3615 |
| MuDR-IS905 | 8 | 490 |
| Unclassified | 6 | 447 |
| Small RNA | 39 | 6023 |
| Satellites | 2 | 320 |
| Simple repeats | 231 | 10,584 |
| Low complexity | 3311 | 130,763 |
|
| ||
| Total | 3824 | 169,623 |