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. 2021 Mar 15;11:5916. doi: 10.1038/s41598-021-84265-y

Figure 7.

Figure 7

Molecular phylogeny of the Chlorellaceae based on SSU and ITS sequence comparisons. The phylogenetic trees shown were inferred using the maximum likelihood method based on the data sets (2604 aligned positions of 31 taxa) using PAUP 4.0a166. For the analyses, the best model was calculated by Modeltest 3.7. The setting of the best model was given as follows: GTR+I+G (base frequencies: A 0.2160, C 0.2732, G 0.2728, T 0.2380; rate matrix A–C 0.8499, A–G 1.2840, A–U 1.1061, C–G 0.6217, C–U 3.1850, G–U 1.0000) with the proportion of invariable sites (I = 0.6996) and gamma shape parameter (G = 0.5575). The branches in bold are highly supported in all analyses (Bayesian values > 0.95 calculated with MrBayes, 5 million generations; bootstrap values > 70%, calculated with PAUP, 1000 replicates using maximum likelihood, neighbour-joining, and maximum parsimony). The endosymbionts that were previously detected in Paramecium bursaria are marked with an asterisk.