Table 5.

Summary of single nucleotide polymorphism (SNP) marker mapping in F3-derived F5 mapping population from Glenn x PI 547656.

Chr a	LG b	Length (cM) c	No. all SNPs d	All SNP coverage e	No. P-SNPs d	P-SNPs coverage e	No. of mapped SNPs
1	D1a	70.90	263	0.270	71	0.999	71
2	D1b	88.42	329	0.269	80	1.105	79
3	N	50.14	280	0.179	86	0.583	72
4	C1	38.42	266	0.144	64	0.600	50
5	A1	87.63	294	0.298	95	0.922	95
6	C2	95.03	313	0.304	86	1.105	86
7	M	55.13	319	0.173	45	1.225	45
8	A2	92.40	380	0.243	91	1.015	90
9	K	81.39	261	0.312	77	1.057	75
10	O	66.34	317	0.209	77	0.862	72
11	B1	63.03	279	0.226	39	1.616	39
12	H	68.79	258	0.267	45	1.529	44
13	F	70.78	381	0.186	61	1.160	60
14	B2	27.58	275	0.100	66	0.418	38
15	E	65.48	305	0.215	71	0.922	70
16	J	45.66	238	0.192	54	0.846	54
17	D2	55.85	265	0.211	41	1.362	40
18	G	37.01	380	0.097	107	0.346	92
19	L	40.36	326	0.124	41	0.984	40
20	I	78.35	271	0.289	60	1.306	60
Mean		63.93	300	0.215	67.85	0.998	63.60
Total		1278.69	6000		1357		1272

^a Chromosome. ^b Linkage group. ^c Chromosome length in centimorgan. ^d SNP, single nucleotide polymorphism. Number of markers screened for each chromosome: all SNPs (all 6K SNPs), and P-SNPs (polymorphic SNPs). ^e Distribution of SNP markers on chromosomes (total chromosome length/number of SNP markers screened): all SNPs (all 6K SNPs), and P-SNPs (polymorphic SNPs).