Table A2.
Quality and quantity of DNA used in the PCR reaction. Data are presented as the mean (n = 3).
| Culture Collection ID | Mean Concentration of DNA (µg·mL−1) | SD | Mean A 260:280 Ratio | SD | Mean A 260:230 Ratio | SD |
|---|---|---|---|---|---|---|
| HLA 1-7 | 1025.00 | 15.00 | 2.38 | 0.03 | 0.59 | 0.01 |
| HLA 2-1 | 9120.00 | 5.00 | 2.08 | 0.01 | 1.47 | 0.00 |
| HLA 2-2 | 355.10 | 1.31 | 2.16 | 0.00 | 0.51 | 0.00 |
| HLA 2-5 | 868.33 | 7.64 | 2.65 | 0.06 | 0.56 | 0.01 |
| HLA 2-7 | 481.67 | 7.64 | 2.96 | 0.16 | 0.34 | 0.00 |
| HLB 1-3 | 2370.00 | 10.00 | 2.10 | 0.02 | 1.35 | 0.02 |
| HLB 2-6 | 343.33 | 2.89 | 6.45 | 1.66 | 0.24 | 0.01 |
| HLC 10 | 41.83 | 0.31 | 1.76 | 0.04 | 0.43 | 0.02 |
| HLC 2 | 748.33 | 18.93 | 2.58 | 0.04 | 0.51 | 0.01 |
| HLC 4 | 96.93 | 0.15 | 2.07 | 0.01 | 1.35 | 0.01 |
| HLC 7 | 71.40 | 0.26 | 2.10 | 0.02 | 0.15 | 0.00 |
| HLC 8 | 1715.00 | 13.23 | 1.93 | 0.04 | 1.32 | 0.01 |
| HLC 9 | 13.30 | 0.10 | 2.88 | 0.13 | 0.01 | 0.00 |
| K 1-1 | 3030.00 | 5.00 | 1.81 | 0.02 | 1.65 | 0.01 |
| K 1-7 | 5763.33 | 10.41 | 2.07 | 0.01 | 1.92 | 0.01 |
| K 2-4 | 6.43 | 0.15 | 2.16 | 0.05 | 1.53 | 0.07 |
| K 4-3 | 1025.17 | 2.04 | 2.19 | 0.00 | 1.01 | 0.01 |
| K 1-4 | 83.50 | 11.32 | 2.25 | 0.02 | 1.66 | 0.02 |
| K 4-6 | 14503.33 | 595.01 | 1.54 | 0.02 | 0.94 | 0.01 |
| K 4-7 | 851.67 | 24.58 | 2.28 | 0.09 | 0.93 | 0.02 |
| KA 1-1 | 2835.00 | 15.00 | 2.14 | 0.02 | 1.91 | 0.00 |
| KA 1-2 | 349.00 | 37.07 | 1.63 | 0.06 | 0.46 | 0.02 |
| KB 1-6 | 676.67 | 2.89 | 2.33 | 0.02 | 1.02 | 0.01 |
| KC 1-4 | 5255.00 | 620.91 | 1.65 | 0.03 | 0.74 | 0.02 |
| PC 2-5 | 6703.33 | 17.56 | 1.98 | 0.01 | 2.28 | 0.01 |
| RL 2-2 | 46.03 | 6.29 | 1.98 | 0.01 | 1.39 | 0.01 |
| RL 2-4 | 2006.67 | 5.77 | 1.80 | 0.01 | 1.80 | 0.02 |
| RP 2-4 | 10273.33 | 270.02 | 1.99 | 0.03 | 1.93 | 0.12 |
| RP 4-2 | 143.37 | 0.57 | 1.94 | 0.02 | 0.41 | 0.00 |
| TKB 1-4 | 1471.67 | 265.58 | 1.83 | 0.02 | 1.11 | 0.01 |
| TKC 1-6 | 262.87 | 6.81 | 1.45 | 0.11 | 1.21 | 0.08 |
| TKC 1-7 | 712.77 | 5.46 | 2.01 | 0.01 | 0.85 | 0.01 |
| TKC 1-8 | 2238.33 | 17.56 | 1.76 | 0.04 | 1.19 | 0.02 |
| TKC 2-1 | 33.00 | 5.00 | 1.68 | 0.13 | 0.36 | 0.00 |
| TKC 2-2 | 226.07 | 3.66 | 2.01 | 0.01 | 0.32 | 0.01 |
| TLA 2-11 | 267.63 | 4.35 | 1.35 | 0.02 | 1.09 | 0.02 |
| TLA 3-2 | 11.80 | 1.41 | 3.22 | 0.40 | 0.55 | 0.04 |
| TLB 1-1 | 388.77 | 11.46 | 1.99 | 0.03 | 0.51 | 0.01 |
| TLB 1-2 | 209.80 | 0.72 | 1.54 | 0.01 | 0.47 | 0.01 |
| TLB 1-3 | 862.40 | 1.49 | 1.98 | 0.01 | 1.23 | 0.01 |
| TLB 2-7 | 8923.33 | 12.58 | 1.90 | 0.01 | 1.89 | 0.01 |
| TLB 2-9 | 3908.33 | 5.77 | 1.90 | 0.01 | 1.57 | 0.01 |
| TLC 1-8 | 1383.33 | 89.63 | 1.49 | 0.02 | 0.46 | 0.01 |
| TLC 2-2 | 1835.00 | 10.00 | 1.83 | 0.01 | 0.81 | 0.01 |
| TPA 1-2 | 27.17 | 2.28 | 1.61 | 0.02 | 0.74 | 0.04 |
| TPA 1-3 | 1214.97 | 2.37 | 2.02 | 0.01 | 1.75 | 0.01 |
| TPA 2-6 | 427.73 | 34.40 | 1.67 | 0.07 | 0.82 | 0.06 |
| TPA 3-10 | 374.47 | 8.12 | 2.03 | 0.02 | 0.71 | 0.01 |
| TPA 3-8 | 2078.33 | 10.41 | 1.82 | 0.03 | 0.98 | 0.01 |
| TPB 1-1 | 80.53 | 0.25 | 1.92 | 0.01 | 0.11 | 0.00 |
| TPB 2-7 | 243.83 | 6.17 | 1.97 | 0.02 | 0.31 | 0.01 |
| TPB 2-8 | 236.00 | 7.21 | 1.58 | 0.01 | 0.39 | 0.00 |
| TPC 1-12 | 879.23 | 10.06 | 1.97 | 0.00 | 1.05 | 0.01 |
| TPC 1-2 | 4595.00 | 21.79 | 1.79 | 0.00 | 1.68 | 0.01 |