Table 1 -.
List of all viral construct variants included in the database with the corresponding number of entries (i.e. injection experiments).
| N | |||||||
|---|---|---|---|---|---|---|---|
| AAV5 | 374 | CaMKIIα | 365 | hChR2(H134R)a | 397 | eYFP | 462 |
| AAV9 | 134 | hSyn | 224 | No opsin | 198 | GFP | 175 |
| AAV1 | 79 | CAG | 105 | C1V1(E122T/E162T)a | 107 | mCherry | 137 |
| AAV9; AAV5* | 78 | rTH; Ef1a* | 78 | ArchTb | 66 | eGFP | 76 |
| Lentivirus | 77 | CMV | 54 | Jawsb | 64 | tdTomato | 57 |
| AAV8 | 68 | CaMKII0.4 | 43 | ChrimsonRa | 36 | Not present | 39 |
| VSVg/lenti | 35 | Ef1a | 18 | C1V1a | 30 | Venus | 37 |
| AAV8M(Y733F) | 34 | CAG Flex | 17 | eNphR3.0b | 25 | YFP | 15 |
| AAV7 | 28 | hThy1 | 13 | Chronosa | 16 | mCitrine | 10 |
| CAV2 | 26 | hCMV | 13 | SwiChR++b | 12 | DsRedII | 7 |
| AAV2 | 24 | L7 | 12 | GtACR2b | 8 | BFP | 1 |
| AAV2-retro | 20 | hDLX | 11 | C1V1(E162T)a | 7 | RFP | 1 |
| FuG-B2(HiRet) | 14 | SAD | 7 | eArch3.0b | 7 | mNEon | 1 |
| RV | 7 | MmCaMKIIα0.4 | 7 | eNpHRb | 6 | ||
| AAV-retro | 5 | TH | 6 | ChETAa | 6 | ||
| EIAV-Rabies-VSVg | 5 | CBA | 4 | Archb | 4 | ||
| AAV6 | 5 | a-CaMKII | 4 | ArchT3.0b | 4 | ||
| HSV | 5 | PGK | 4 | oChlEFa | 4 | ||
| AAV2; AAV5* | 4 | GAD67 | 3 | ChR2(C128S/D156A)a | 3 | ||
| EIAV-Rabies | 3 | MmCaMKIIα1.3 | 3 | NpHRb | 3 | ||
| AAVDJ | 2 | phSyn1(S) | 2 | ChR2(E123A)a | 2 | ||
| LVV | 2 | dbh | 2 | SFOa | 1 | ||
| LT-HSV | 1 | hChAT | 2 | SFFOa | 1 | ||
| Rabies | 1 | EF1a/IRES | 1 | ||||
| pCAG | 1 | ||||||
| hCMV(en)hSyn | 1 |
indicates when two viral constructs were mixed in the same solution.
Excitatory opsin,
Inhibitory opsin.
Legend. LT-HSV: Long-term herpes simplex virus; AAV: Adeno-associated virus; LVV: Lentiviral vector; EIAV: Equine infectious anemia virus; VSV: Vesicular stomatitis virus; RV: Retroviral vector; FuG: Fusion envelope glycoprotein; CAV: canine adenovirus; EF1a: Elongation factor-1 alpha; IRES: Internal ribosome entry site; CAG: cytomegalovirus enhancer, chicken beta-actin promoter and rabbit beta globin splice acceptor site; CMV: Cytomegalovirus; hCMV(en)hSyn: human synapsin-1 promoter preceded by the CMV enhancer; dbh: dopamine beta-hydroxylase; hChAT: Human choline acetyltransferase; GAD67: Glutamic acid decarboxylase 67; CamKIIa: Ca2+/calmodulin-dependent protein kinase II; MmCAMKIIα: Mus musculus CamKIIa; CBA: Chicken β-actin; PGK: Phosphoglycerate kinase; TH: Tyrosine hydroxylase; SAD: stearoyl-acyl carrier protein desaturase; hDLX: human distal-less homeobox; L7: Purkinje cell protein 2; hThy1: human thymocyte-1; Flex: Flip-excision; SFO: Step-function opsin; SFFO: Stabilized step-function opsin; ChR2: Channelrhodopsin-2; NpHR: Natronomonas pharaonis halorhodopsin; Arch: Archaerhodopsin; GtACR2: Guillardia theta anion-conducting channelrhodopsin; SwiChR: Step-waveform inhibitory channelrhodopsin; BFP: Blue fluorescent protein; RFP: Red fluorescent protein; YFP: Yellow fluorescent protein; GFP: Green fluorescent protein.