Fig. 3.

Comparison of AUCs achieved in four groups of GO terms from CC with different sizes. The four groups contain terms with sizes in ranges [5–10], [11–20], [21–75] and [76–1000], respectively. (a) The average AUC values achieved by the terms in the four groups are 0.767, 0.734, 0.718 and 0.705, respectively. The plot shows that generally as the size of a GO term increases, its achieved AUC actually decreases. (b) DeepIsoFun consistently performed better on MIGs over SIGs. The average AUC values on MIGs achieved in the four groups are 0.79, 0.748, 0.745 and 0.709, respectively. The average AUC values on SIGs achieved by in four groups are 0.755, 0.702, 0.693 and 0.675, respectively