TABLE 3.

Analysis of variance p-values for trichome density in October 2019 fitting a linear model of effects of haplotype (Hap), replication (Rep), rater (Rater), and number of genotypes within each haplotype (Hap:NoGeno).

Analysis	Effect	√adaLHDr	√adaVHDr	abaVHDr	logeadaVHDs	abaVHDs
ANOVA	Hap	<0.001	<0.001	<0.001	<0.001	<0.001
	Rep	<0.01	<0.01	<0.001	<0.01	ns
	Rater	<0.001	<0.001	<0.01	–	–
	Hap:NoGeno	<0.001	<0.001	<0.001	<0.001	<0.001
Tukey’s HSD	Mean difference μL–μH	-0.87	-1.22	1.12	0.04	-1.40
	P-value	0.0072	<0.001	ns (0.087)	ns	0.042

Tukey’s HSD difference between means of low (L) and high trichome density (H) haplotypes at 12.6–13.4 Mbp on chromosome 1. ada, adaxial; aba, abaxial; LHD, leaf hair density; VHD, vein hair density; r, ribbon trichome; s, simple trichome; √, square root transformation; log_e, natural log transformation. AbaLHDr, adaLHDs, and abaLHDs did not have normally distributed residuals after transformation.