Table 1.

Number of up- and downregulated transcripts (at FDR < 0.1; p < 0.1) of genes included into GO terms ‘Cellular component organization’ (GO:0016043) and ‘Cellular anatomical entity’ (GO:0110165) in different types of MPS relative to control cells (HDFa).

Transcripts	No. of Transcripts with Changed Expression Levels in Each MPS Type vs. HDFa Line
	I	II	IIIA	IIIB	IIIC	IIID	IVA	IVB	VI	VII	IX
	Cellular component organization (GO:0016043)
Upregulated	123	79	139	145	124	114	49	162	68	131	129
Downregulated	139	54	183	159	126	147	73	151	41	156	183
Total	262	133	322	304	250	261	122	313	109	287	312
	Cellular anatomical entity (GO:0110165)
Upregulated	75	54	75	90	86	57	38	93	37	60	83
Downregulated	96	41	125	104	99	85	45	115	33	98	109
Total	171	95	200	194	185	142	83	208	70	158	192