Table 1.
Number of differentially expressed genes (DEGs) for each comparison
| Treatment 1 | Treatment 2 | Upregulated (Treatment 2 / Treatment 1) | Downregulated (Treatment 2 / Treatment 1) | Total DEGs |
|---|---|---|---|---|
| Mp708 (0 hpi) Leaves | Mp708 (24 hpi) Leaves | 2226 (56.1%) | 1738 (43.8%) | 3964 |
| Tx601 (0 hpi) Leaves | Tx601 (24 hpi) Leaves | 1578 (45.6%) | 1885 (54.4%) | 3463 |
| Mp708 (0 hpi) Roots | Mp708 (24 hpi) Roots | 3305 (40.9%) | 4769 (59.1%) | 8074 |
| Tx601 (0 hpi) Roots | Tx601 (24 hpi) Roots | 2972 (40.6%) | 4333 (59.4%) | 7305 |
| Mp708 (0 hpi) Leaves | Tx601 (0 hpi) Leaves | 3218 (54.7%) | 2662 (45.3%) | 5880 |
| Mp708 (24 hpi) Leaves | Tx601 (24 hpi) Leaves | 3045 (48.5%) | 3230 (51.6%) | 6275 |
| Mp708 (0 hpi) Roots | Tx601 (0 hpi) Roots | 3073 (52.6%) | 2773 (47.4%) | 5846 |
| Mp708 (24 hpi) Roots | Tx601 (24 hpi) Roots | 3720 (55.6%) | 2969 (44.4%) | 6689 |
hpi hours post infestation; Percentage of DEGs up or downregulated are indicated in parenthesis