Table 7.
The topological characteristics of the top 25 gene nodes in the PPI network of the green module within the GSE92681 dataset.
Name | Degree | Average shortest path length | Betweenness centrality | Closeness centrality | Clustering coefficient | Topological coefficient | Regulate |
---|---|---|---|---|---|---|---|
PSMA2 | 145 | 2.84572072 | 0.30956005 | 0.35140483 | 0 | 0.01436782 | Other gene |
IK | 83 | 3.14752252 | 0.16898579 | 0.3177102 | 0 | 0.02628697 | mRNA down |
BCAR1 | 82 | 3.0731982 | 0.18704239 | 0.32539392 | 0 | 0.02264808 | Other gene |
TCF12 | 77 | 2.88400901 | 0.27221312 | 0.34673955 | 0 | 0.01974026 | Other gene |
SAV1 | 74 | 3.6768018 | 0.14809265 | 0.2719755 | 0 | 0.02402402 | Other gene |
NDN | 61 | 3.29391892 | 0.12878792 | 0.30358974 | 0 | 0.02157032 | Other gene |
ERGIC3 | 55 | 3.31644144 | 0.11672478 | 0.30152801 | 0 | 0.02121212 | Other gene |
ASB3 | 38 | 3.51914414 | 0.07839935 | 0.28416 | 0 | 0.03827751 | Other gene |
MMP7 | 37 | 4.70157658 | 0.08120061 | 0.21269461 | 0 | 0.04054054 | mRNA up |
WT1 | 35 | 3.74887387 | 0.08035061 | 0.26674677 | 0 | 0.04642857 | Other gene |
DGCR14 | 32 | 3.37274775 | 0.05414526 | 0.29649416 | 0 | 0.05208333 | Other gene |
RIOK3 | 28 | 3.19256757 | 0.06657298 | 0.31322751 | 0 | 0.05844156 | Other gene |
DUS3L | 26 | 3.3704955 | 0.04976931 | 0.29669228 | 0 | 0.05668016 | Other gene |
FAM74A4 | 26 | 4.65202703 | 0.02931155 | 0.21496006 | 0 | 0.19230769 | Other gene |
FAM74A6 | 25 | 4.65427928 | 0.0262998 | 0.21485604 | 0 | 0.19333333 | Other gene |
LRRC1 | 23 | 3.20157658 | 0.05583233 | 0.31234611 | 0 | 0.06126482 | Other gene |
PCYT2 | 21 | 3.31869369 | 0.04192798 | 0.30132338 | 0 | 0.05555556 | Other gene |
UBC | 18 | 2.51351351 | 0.42421401 | 0.39784946 | 0 | 0.06050955 | Other gene |
BCORL1 | 16 | 3.4786036 | 0.02550435 | 0.28747167 | 0 | 0.08455882 | Other gene |
NCOA7 | 13 | 4.68581081 | 0.02298401 | 0.21341024 | 0 | 0.07692308 | Other gene |
STX10 | 13 | 3.48536036 | 0.02685944 | 0.28691438 | 0 | 0.07692308 | Other gene |
SGK3 | 12 | 3.35472973 | 0.03075664 | 0.29808661 | 0 | 0.11507937 | Other gene |
PRKX | 11 | 4.67004505 | 0.01823525 | 0.2141307 | 0 | 0.18181818 | Other gene |
RNF135 | 10 | 4.73536036 | 0.01245585 | 0.21117717 | 0 | 0.2 | Other gene |
DFNA5 | 9 | 3.49436937 | 0.01078561 | 0.28617467 | 0 | 0.16339869 | Other gene |