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. 2021 Mar 17;11:6086. doi: 10.1038/s41598-021-85486-x

Figure 4.

Figure 4

In silico analysis of relevant genes involved in the betalain biosynthesis pathway of A. tricolor. (a) The relative abundance of transcripts between AMR and AMG is presented in the MA plot (logCPM vs. logFC). Each dot presents a gene, and the relevant genes associated with betalain pigment synthesis are highlighted. (b) Phylogenetic tree of functionally characterized DODAα homologues. The species, families, and accession numbers of the DODAα homologues are available in Supplementary Table S6. (c) Proportional LOGO plots of seven functionally important residues identified by Bean et al. (2018)21 were generated based on the DODAα1 and DODAα2 homologues listed in (b). Positions are numbered according to the residues of AmDODAα1 and AmDODAα2.