Table 3.
Citrus Hormone Metabolism and Signaling Transcripts Differentially Expressed between CLas and Control Grafted Lemon Plantsa
| gene ID | description | weeks post graft CLas response | CLas | control |
|---|---|---|---|---|
| XM_006449381.1 | ethylene response factor | 10 up | 20.4 | 5.21 |
| XM_006467633.2 | ethylene response factor | 10 up | 12.2 | 3.06 |
| XM_006477062.2 | ethylene responsive element binding factor | 10 up | 34.5 | 4.85 |
| XM_006432477.1 | ethylene-insensitive 3 (EIN3) | 10 up | 2.25 | 0 |
| XM_006482231.2 | allene oxide cyclase 4 | 2 down | 0 | 4.38 |
| XM_006437669.1 | allene oxide cyclase 3 | 10 up | 13.1 | 2.4 |
| XM_006434833.1 | allene oxide synthase | 10 up | 1.65 | 0.2 |
| XM_006426618.1 | lipoxygenase 3 | 10 up | 123.4 | 42.1 |
| XM_006465842.2 | lipoxygenase 3 | 10 up | 10.3 | 2.5 |
| XM_006438782.1 | jasmonate-zim-domain protein | 10 up | 13.5 | 2.09 |
| orange1.1 g028898m | jasmonate-zim-domain protein | 10 up | 50.7 | 7.67 |
| XM_006452782.1 | jasmonate-zim-domain protein | 10 up | 7.49 | 0.46 |
| XM_006449649.1 | jasmonate-zim-domain protein | 10 up | 5.39 | 0.3 |
| XM_006474637.2 | jasmonate-zim domain protein | 10 up | 2.61 | 0.09 |
| XM_006426643.1 | jasmonate-zim-domain protein | 10 up | 19.5 | 0.41 |
| XM_006474637.2 | jasmonate-zim-domain protein | 10 up | 9.29 | 0.77 |
| XM_006422814.1 | Auxin-responsive GH3 family protein | 10 up | 5.58 | 0.35 |
| XM_006449629.1 | gibberellin 2-oxidase | 10 up | 2.13 | 0.47 |
| XM_006430958.1 | Gibberellin-regulated family protein | 10 down | 1.59 | 6.07 |
| XM_006422805.1 | Gibberellin-regulated family protein | 10 down | 0 | 2.52 |
| XM_006435008.1 | cytokinin oxidase 5 | 10 down | 7.8 | 33.8 |
a
Average read counts from RNaseq analysis of three biological replicate plants per treatment per time point. See Table 2 for read counts for ACC oxidase and SAM dehydrogenase.