Table 2.
Dataset | Model | AUROC (95% CI) | AUPR (95% CI) | Sensitivity, recall, TPR (95% CI) | Specificity, selectivity, TNR (95% CI) | Precision PPV (95% CI) | score (95% CI) | BA (95% CI) |
---|---|---|---|---|---|---|---|---|
Test set #1 | PA | 0.98 (0.97–0.99) | 0.99 (0.98–0.99) | 0.97 (0.94–1.00) | 0.88 (0.80–0.94) | 0.93 (0.89–0.96) | 0.95 (0.92–0.97) | 0.93 (0.89–0.96) |
LAT | 0.98 (0.97–0.99) | 0.99 (0.98–0.99) | 0.97 (0.94–1.00) | 0.91 (0.84–0.96) | 0.94 (0.91–0.97) | 0.96 (0.93–0.98) | 0.94 (0.90–0.97) | |
Ensemble | 0.99 (0.98–0.99) | 0.99 (0.99–0.99) | 0.97 (0.94–1.00) | 0.87 (0.79–0.93) | 0.92 (0.88–0.96) | 0.95 (0.92–0.97) | 0.92 (0.88–0.96) | |
Test set #2 | PA | 0.81 (0.69–0.91) | 0.61 (0.44–0.80) | 0.50 (0.30–0.70) | 0.89 (0.82–0.95) | 0.52 (0.33–0.73) | 0.51 (0.31–0.68) | 0.69 (0.58–0.80) |
LAT | 0.83 (0.70–0.93) | 0.57 (0.41–0.80) | 0.50 (0.30–0.70) | 0.94 (0.88–0.98) | 0.66 (0.46–0.90) | 0.57 (0.36–0.75) | 0.72 (0.60–0.83) | |
Ensemble | 0.84 (0.72–0.93) | 0.64 (0.46–0.83) | 0.60 (0.40–0.80) | 0.92 (0.87–0.97) | 0.66 (0.48–0.87) | 0.63 (0.44–0.80) | 0.76 (0.65–0.87) |
Here, AUROC is area under the receiver operating characteristic, AUPR is the area under precision recall curve, CI is confidence interval, 95% CI is shown in parentheses, TPR is true positive rate, TNR is true negative rate and PPV is positive predictive value and BA stands for balanced accuracy.