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. 2020 Mar 20;217(6):e20190730. doi: 10.1084/jem.20190730

Table 1. Mouse RPE/choroid cell types identified by scRNAseq.

Cluster number Cell type Cell number Percentage of total Average UMIs/cell Average genes/cell Average UMIs/gene
C57BL/6J mice B6129PF1/J mice C57BL/6J mice B6129PF1/J mice C57BL/6J mice B6129PF1/J mice C57BL/6J mice B6129PF1/J mice C57BL/6J mice B6129PF1/J mice
1 RPE 402 445 10.1 11.9 4,860 7,514 1,468 1,911 3.02 3.51
2 ECs 405 366 10.1 9.8 4,550 5,151 1,920 2,090 2.18 2.32
3 ECs 550 435 13.8 11.7 4,847 5,570 1,943 2,139 2.28 2.42
4 ECs 74 63 1.9 1.7 4,749 5,196 1,894 2,025 2.26 2.37
5 Stromal cells 776 797 19.4 21.4 3,255 3,723 1,524 1,645 2.09 2.21
6 Stromal cells 610 552 15.3 14.8 3,171 3,796 1,491 1,681 2.07 2.21
7 Stromal cells 223 229 5.6 6.1 3,695 4,518 1,684 1,894 2.14 2.32
8 Stromal cells 158 166 4.0 4.5 2,995 3,944 1,391 1,661 2.13 2.33
9 Smooth muscle cells 476 400 11.9 10.7 3,863 4,769 1,583 1,814 2.38 2.58
10 Melanocytes 28 20 0.7 0.5 3,913 5,008 1,621 1,847 2.32 2.59
11 Hematopoietic cells 140 116 3.5 3.1 4,573 4,960 1,528 1,496 2.83 3.19
12 Schwann cells 108 106 2.7 2.8 2,525 2,835 1,306 1,418 1.90 1.96
13 Schwann cells 46 32 1.2 0.9 2,606 3,532 1,227 1,495 2.08 2.31
Total 3,996 3,727

Data are from C57BL/6J and B6129PF1/J mice (pooled cells from one male and one female for each strain).