TABLE 1.
Drug | Protein form | MolDock score | Protein – ligand interactions | H-bonds | Interacting amino acids |
Chloroquine | Closed | –74.777 | –93.770 | 0.000 | —– |
Open | –72.019 | –89.604 | –4.967 | Gln957, Lys964 | |
Hydroxychloroquine | Closed | –84.427 | –107.534 | –4.970 | Thr961 |
Open | –89.421 | –107.043 | –4.329 | Gln1010 | |
Ivermectin | Closed | –140.584 | –139.371 | –9.530 | Thr307, Glu309, Ile3,12, Asn953 |
Open | –140.581 | –127.699 | –5.495 | Lys310, Tyr313, Asn953 | |
Remdesivir | Closed | –111.007 | –122.699 | –10.106 | Leu303, Glu309, Asn953 |
Open | –110.367 | –111.887 | –9.071 | Thr961, Arg1014 | |
Favipiravir | Closed | –59.437 | –78.637 | –12.229 | Tyr1007, Gln1011, Arg1014 |
Open | –54.176 | –68.112 | –6.432 | Arg1014 |
Docking parameters was conducted using Molegro Virtual Docker 6.0.